PSIBLAST alignment of GI: 254780647 and protein with PDB id: 1pnu

>gi|34811574|pdb|1PNU|U Chain U, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 86
>gi|34811627|pdb|1PNY|U Chain U, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 86
 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 5/89 (5%)

Query: 2  AHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYA 61
          AHKK  GS++NGRDS  + LG+KK GG+ V AGNI++RQRGT++  G  VG+G+DHT++A
Sbjct: 1  AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFA 60

Query: 62 LVDGHVRFFKKFSKGRAYVSVIPKIEDTQ 90
          L DG V F  K    R ++S+    E  Q
Sbjct: 61 LSDGKVVFINKGKGAR-FISI----EAAQ 84