HHsearch alignment for GI: 254780648 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=99.97 E-value=6.4e-31 Score=207.26 Aligned_cols=158 Identities=27% Similarity=0.457 Sum_probs=128.9
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCC----CHHHHHHHHHHH
Q ss_conf 1244216777530354101454012121100000010266329868998226421247311677----512344333335
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAG----IGDRFLKHTERT 237 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~g----lG~~FLrhIer~ 237 (335)
T Consensus 171 ivVaG~PNVGKSSlv~~lT~AkpEvA~YPFTTK~i~vGhfe~~~~R~QvIDTPGlLDRPl~ErN~IE~qAi~AL~hl~-- 248 (346)
T COG1084 171 IVVAGYPNVGKSSLVRKLTTAKPEVAPYPFTTKGIHVGHFERGYLRIQVIDTPGLLDRPLEERNEIERQAILALRHLA-- 248 (346)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHC--
T ss_conf 898569987589999887548976678885336546765504870589842886457885773689999999999742--
Q ss_pred HHHHHHCCCCCCC--HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH
Q ss_conf 7887520222211--01346667899877766750598899997465899889999999999862994899988878899
Q gi|254780648|r 238 HVLLHIVSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGI 315 (335)
Q Consensus 238 ~vLl~VVD~s~~d--~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI 315 (335)
T Consensus 249 ~~IlF~~D~Se~cgy~lE~Q~~L~~eIk~----~f~~p~v~V~nK~D~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (346)
T COG1084 249 GVILFLFDPSETCGYSLEEQISLLEEIKE----LFKAPIVVVINKIDIADEEKLEEIEASVLEEGGEEPLKISATKGCGL 324 (346)
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHH----HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHH
T ss_conf 85899976850028999999999999998----53887699974101246667899999987632655431354300017
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780648|r 316 PQILECLHDK 325 (335)
Q Consensus 316 ~eL~~~I~e~ 325 (335)
T Consensus 325 d~~~~~v~~~ 334 (346)
T COG1084 325 DKLREEVRKT 334 (346)
T ss_pred HHHHHHHHHH
T ss_conf 8899999887