HHsearch alignment for GI: 254780648 and conserved domain: COG1159

Probab=99.96  E-value=3.6e-30  Score=202.73  Aligned_cols=158  Identities=28%  Similarity=0.379  Sum_probs=126.3

Q ss_pred             EEEEECCCCCCCEEEEEECCCCCHH-HHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHH----HHHHHH
Q ss_conf             1244216777530354101454012-12110000001026632986899822642124731167751234----433333
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRF----LKHTER  236 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~ak~kI-a~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~F----LrhIer  236 (335)
T Consensus         9 VaIiGrPNvGKSTLlN~l~G~KisIvS~k~QTTR~~I~GI~t~~~~QiIfvDTPGih~pk~---~l~~~m~~~a~~sl~d   85 (298)
T COG1159           9 VAIIGRPNVGKSTLLNALVGQKISIVSPKPQTTRNRIRGIVTTDNAQIIFVDTPGIHKPKH---ALGELMNKAARSALKD   85 (298)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHEEEEEECCCCEEEEEECCCCCCCCH---HHHHHHHHHHHHHHCC
T ss_conf             9998699876899998985682575159853114421479986984499984898887651---7889999999987245


Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-HHHHHHHHHHHCC-CCEEEEECCCCCC
Q ss_conf             5788752022221101346667899877766750598899997465899889-9999999998629-9489998887889
Q gi|254780648|r  237 THVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCG-QVPFEFSSITGHG  314 (335)
Q Consensus       237 ~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~-~~~~~~~l~~~~~-~~vi~ISA~tg~G  314 (335)
T Consensus        86 vDlilfvvd~~~~~~~-~d~~il~~lk~-----~~~pvil~iNKID~~~~~~~l~~~~~~~~~~~~f~~ivpiSA~~g~n  159 (298)
T COG1159          86 VDLILFVVDADEGWGP-GDEFILEQLKK-----TKTPVILVVNKIDKVKPKTVLLKLIAFLKKLLPFKEIVPISALKGDN  159 (298)
T ss_pred             CCEEEEEEECCCCCCC-CHHHHHHHHHH-----CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
T ss_conf             7599999866656891-07999997764-----38986999984025784778999999998508830179951015678


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999985
Q gi|254780648|r  315 IPQILECLHDKIFS  328 (335)
Q Consensus       315 I~eL~~~I~e~L~~  328 (335)
T Consensus       160 ~~~L~~~i~~~Lpe  173 (298)
T COG1159         160 VDTLLEIIKEYLPE  173 (298)
T ss_pred             HHHHHHHHHHHCCC
T ss_conf             89999999985888