HHsearch alignment for GI: 254780648 and conserved domain: COG1160
>COG1160 Predicted GTPases [General function prediction only].
Probab=99.93 E-value=5.3e-26 Score=177.46 Aligned_cols=158 Identities=27% Similarity=0.304 Sum_probs=124.3
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHH-HHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCC--CCCCHHHHHHHHHHH
Q ss_conf 11244216777530354101454012-121100000010266329868998226421247311--677512344333335
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKI-ADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQ--GAGIGDRFLKHTERT 237 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kI-a~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~--~~glG~~FLrhIer~ 237 (335)
T Consensus 5 ~VAIVGRPNVGKSTLFNRL~g~r~AIV~D~pGvTRDr~y~~~~~~~~~f~lIDTgGl~~~~~~~l~~~i~~Qa~~Ai~eA 84 (444)
T COG1160 5 VVAIVGRPNVGKSTLFNRLTGRRIAIVSDTPGVTRDRIYGDAEWLGREFILIDTGGLDDGDEDELQELIREQALIAIEEA 84 (444)
T ss_pred EEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 89998999875899998875770267606999755775450698386079997899776881289999999999999767
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf 78875202222110134666789987776675059889999746589988999999999986299489998887889999
Q gi|254780648|r 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 (335)
Q Consensus 238 ~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~e 317 (335)
T Consensus 85 DvilfvVD~~~Git~~D-~~ia~~Lr~-----~~kpviLvvNK~D~~~~e---~~~~efyslG~g~~~~ISA~Hg~Gi~d 155 (444)
T COG1160 85 DVILFVVDGREGITPAD-EEIAKILRR-----SKKPVILVVNKIDNLKAE---ELAYEFYSLGFGEPVPISAEHGRGIGD 155 (444)
T ss_pred CEEEEEEECCCCCCHHH-HHHHHHHHH-----CCCCEEEEEECCCCCHHH---HHHHHHHHCCCCCCEEEEHHHCCCHHH
T ss_conf 99999984887899789-999999985-----399889999766673045---648999864789826842553569899
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999998
Q gi|254780648|r 318 ILECLHDKIF 327 (335)
Q Consensus 318 L~~~I~e~L~ 327 (335)
T Consensus 156 Lld~v~~~l~ 165 (444)
T COG1160 156 LLDAVLELLP 165 (444)
T ss_pred HHHHHHHHCC
T ss_conf 9999997567