HHsearch alignment for GI: 254780648 and conserved domain: COG1162
>COG1162 Predicted GTPases [General function prediction only].
Probab=97.34 E-value=0.00015 Score=47.44 Aligned_cols=82 Identities=18% Similarity=0.212 Sum_probs=52.9
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH-HHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf 875202222110134666789987776675059889999746589988999-9999999862994899988878899999
Q gi|254780648|r 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA-RKKNELATQCGQVPFEFSSITGHGIPQI 318 (335)
Q Consensus 240 Ll~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~-~~~~~l~~~~~~~vi~ISA~tg~GI~eL 318 (335)
T Consensus 83 ~iiIvs~~~P~~~~--~~ldR~Lv~ae--~~gi~pvIvlnK~DL~~~~~~~~~~~~~~y~~~gy~v~~~s~~~~~~~~~l 158 (301)
T COG1162 83 AIIVVSLVDPDFNT--NLLDRYLVLAE--AGGIEPVIVLNKIDLLDDEEAAVKELLREYEDIGYPVLFVSAKNGDGLEEL 158 (301)
T ss_pred EEEEEECCCCCCCH--HHHHHHHHHHH--HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH
T ss_conf 99999626899898--89999999997--769957999975336761677899999999867935999537676558999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780648|r 319 LECLHDK 325 (335)
Q Consensus 319 ~~~I~e~ 325 (335)
T Consensus 159 ~~~l~~~ 165 (301)
T COG1162 159 AELLAGK 165 (301)
T ss_pred HHHHCCC
T ss_conf 9975588