HHsearch alignment for GI: 254780648 and conserved domain: COG1162

>COG1162 Predicted GTPases [General function prediction only].
Probab=97.34  E-value=0.00015  Score=47.44  Aligned_cols=82  Identities=18%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH-HHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf             875202222110134666789987776675059889999746589988999-9999999862994899988878899999
Q gi|254780648|r  240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA-RKKNELATQCGQVPFEFSSITGHGIPQI  318 (335)
Q Consensus       240 Ll~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~-~~~~~l~~~~~~~vi~ISA~tg~GI~eL  318 (335)
T Consensus        83 ~iiIvs~~~P~~~~--~~ldR~Lv~ae--~~gi~pvIvlnK~DL~~~~~~~~~~~~~~y~~~gy~v~~~s~~~~~~~~~l  158 (301)
T COG1162          83 AIIVVSLVDPDFNT--NLLDRYLVLAE--AGGIEPVIVLNKIDLLDDEEAAVKELLREYEDIGYPVLFVSAKNGDGLEEL  158 (301)
T ss_pred             EEEEEECCCCCCCH--HHHHHHHHHHH--HCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHH
T ss_conf             99999626899898--89999999997--769957999975336761677899999999867935999537676558999


Q ss_pred             HHHHHHH
Q ss_conf             9999999
Q gi|254780648|r  319 LECLHDK  325 (335)
Q Consensus       319 ~~~I~e~  325 (335)
T Consensus       159 ~~~l~~~  165 (301)
T COG1162         159 AELLAGK  165 (301)
T ss_pred             HHHHCCC
T ss_conf             9975588