HHsearch alignment for GI: 254780648 and conserved domain: KOG0088
>KOG0088 consensus.
Probab=98.63 E-value=8.2e-08 Score=67.18 Aligned_cols=155 Identities=16% Similarity=0.201 Sum_probs=100.3
Q ss_pred EEEEECCCCCCCEEEEEEC-----CCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHH--HHHH
Q ss_conf 1244216777530354101-----45401212110000001026632986899822642124731167751234--4333
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVT-----RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRF--LKHT 234 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls-----~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~F--LrhI 234 (335)
T Consensus 16 ~VLLGEGCVGKtSLVLRy~EnkFn~kHlsTlQASF~~kk~n~e---d~ra~L~IWDTAGQ-----------ErfHALGPI 81 (218)
T KOG0088 16 IVLLGEGCVGKTSLVLRYVENKFNCKHLSTLQASFQNKKVNVE---DCRADLHIWDTAGQ-----------ERFHALGPI 81 (218)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC---CCEEEEEEEECCCH-----------HHHHCCCCE
T ss_conf 9997487556068999998723230467899988763304621---11311432124445-----------765235753
Q ss_pred H--HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH-HHHHHHHHHCCCCEEEEECCC
Q ss_conf 3--3578875202222110134666789987776675059889999746589988999-999999986299489998887
Q gi|254780648|r 235 E--RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA-RKKNELATQCGQVPFEFSSIT 311 (335)
Q Consensus 235 e--r~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~-~~~~~l~~~~~~~vi~ISA~t 311 (335)
T Consensus 82 YYRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlG--nei~l~IVGNKiDLEeeR~Vt~qeAe~YAesvGA~y~eTSAk~ 159 (218)
T KOG0088 82 YYRGSNGALLVYDITDRDSFQKVKNWVLELRTMLG--NEIELLIVGNKIDLEEERQVTRQEAEAYAESVGALYMETSAKD 159 (218)
T ss_pred EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHEECCCCC
T ss_conf 77079962899864446889999999999998718--8359999537446788642029889999986333431111102
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 889999999999999854523
Q gi|254780648|r 312 GHGIPQILECLHDKIFSIRGE 332 (335)
Q Consensus 312 g~GI~eL~~~I~e~L~~~r~e 332 (335)
T Consensus 160 N~Gi~elFe~Lt~~MiE~~s~ 180 (218)
T KOG0088 160 NVGISELFESLTAKMIEHSSQ 180 (218)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
T ss_conf 437999999999999987422