HHsearch alignment for GI: 254780648 and conserved domain: KOG0088

>KOG0088 consensus.
Probab=98.63  E-value=8.2e-08  Score=67.18  Aligned_cols=155  Identities=16%  Similarity=0.201  Sum_probs=100.3

Q ss_pred             EEEEECCCCCCCEEEEEEC-----CCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHH--HHHH
Q ss_conf             1244216777530354101-----45401212110000001026632986899822642124731167751234--4333
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVT-----RAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRF--LKHT  234 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls-----~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~F--LrhI  234 (335)
T Consensus        16 ~VLLGEGCVGKtSLVLRy~EnkFn~kHlsTlQASF~~kk~n~e---d~ra~L~IWDTAGQ-----------ErfHALGPI   81 (218)
T KOG0088          16 IVLLGEGCVGKTSLVLRYVENKFNCKHLSTLQASFQNKKVNVE---DCRADLHIWDTAGQ-----------ERFHALGPI   81 (218)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC---CCEEEEEEEECCCH-----------HHHHCCCCE
T ss_conf             9997487556068999998723230467899988763304621---11311432124445-----------765235753


Q ss_pred             H--HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH-HHHHHHHHHCCCCEEEEECCC
Q ss_conf             3--3578875202222110134666789987776675059889999746589988999-999999986299489998887
Q gi|254780648|r  235 E--RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA-RKKNELATQCGQVPFEFSSIT  311 (335)
Q Consensus       235 e--r~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~-~~~~~l~~~~~~~vi~ISA~t  311 (335)
T Consensus        82 YYRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlG--nei~l~IVGNKiDLEeeR~Vt~qeAe~YAesvGA~y~eTSAk~  159 (218)
T KOG0088          82 YYRGSNGALLVYDITDRDSFQKVKNWVLELRTMLG--NEIELLIVGNKIDLEEERQVTRQEAEAYAESVGALYMETSAKD  159 (218)
T ss_pred             EEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHC--CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCHHHEECCCCC
T ss_conf             77079962899864446889999999999998718--8359999537446788642029889999986333431111102


Q ss_pred             CCCHHHHHHHHHHHHHHHHHH
Q ss_conf             889999999999999854523
Q gi|254780648|r  312 GHGIPQILECLHDKIFSIRGE  332 (335)
Q Consensus       312 g~GI~eL~~~I~e~L~~~r~e  332 (335)
T Consensus       160 N~Gi~elFe~Lt~~MiE~~s~  180 (218)
T KOG0088         160 NVGISELFESLTAKMIEHSSQ  180 (218)
T ss_pred             CCCHHHHHHHHHHHHHHHHHH
T ss_conf             437999999999999987422