HHsearch alignment for GI: 254780648 and conserved domain: PRK01889

Probab=97.61  E-value=0.00055  Score=43.97  Aligned_cols=104  Identities=20%  Similarity=0.244  Sum_probs=54.9

Q ss_pred             CEEEEECCCCCCCEEEEEECCCC-CHHHH---H----HHCCCEECCEEEEECCEEEEEECCCCCCCC--CCCCCCCHHHH
Q ss_conf             11244216777530354101454-01212---1----100000010266329868998226421247--31167751234
Q gi|254780648|r  161 DIGIIGLPNAGKSTFLASVTRAK-PKIAD---Y----PFTTLYPNLGIVKEGYKEFILADIPGIIKN--AHQGAGIGDRF  230 (335)
Q Consensus       161 DVglVG~PNaGKSTLln~ls~ak-~kIa~---y----pFTT~~P~lGvv~~~~~~~~i~D~PGlIeg--A~~~~glG~~F  230 (335)
T Consensus       196 T~vl~G~SGVGKSTLiN~L~g~~~~~t~~is~~~~kGRHTTt~reL~~l--p~G-g~lIDTPG~Re~~l~~~~~~l~~~F  272 (353)
T PRK01889        196 TVALLGSSGVGKSTLVNALLGEEVQKTGAVREDDSKGRHTTTHRELHPL--PSG-GLLIDTPGMRELQLWDCEDGVEETF  272 (353)
T ss_pred             EEEEECCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCEECCCEEEEEEC--CCC-CEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf             8999778886699999875653453441500036995001240689994--899-5897379865467778488899977


Q ss_pred             H--------------HHHHH--HHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHH
Q ss_conf             4--------------33333--57887520222-21101346667899877766
Q gi|254780648|r  231 L--------------KHTER--THVLLHIVSAL-EENVQAAYQCILDELSAYNS  267 (335)
Q Consensus       231 L--------------rhIer--~~vLl~VVD~s-~~d~~~~~~~I~~EL~~y~~  267 (335)
T Consensus       273 ~di~~la~~CrF~dC~H~~EPgCAV~~Ave~G~l~~~R~~sY~kL~~E~~~~~~  326 (353)
T PRK01889        273 SDIEELAAQCRFRDCAHEAEPGCAVQAAIENGELDERRLQSYRKLQREQAYNAA  326 (353)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             989998778989389899899889999998699699999999999999999876