HHsearch alignment for GI: 254780648 and conserved domain: PRK12288
>PRK12288 ribosome-associated GTPase; Reviewed.
Probab=97.64 E-value=3.7e-05 Score=51.07 Aligned_cols=54 Identities=24% Similarity=0.276 Sum_probs=32.6
Q ss_pred EEEEECCCCCCCEEEEEEC-CCCCHHHH---HH----HCCCEECCEEEEECCEEEEEECCCCCCC
Q ss_conf 1244216777530354101-45401212---11----0000001026632986899822642124
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVT-RAKPKIAD---YP----FTTLYPNLGIVKEGYKEFILADIPGIIK 218 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls-~ak~kIa~---yp----FTT~~P~lGvv~~~~~~~~i~D~PGlIe 218 (335)
T Consensus 210 svf~GqSGVGKSSLiN~L~p~~~~~tgeIS~~~~~GrHTTt~~~L--~~l~~gG-~lIDTPG~re 271 (344)
T PRK12288 210 SIFVGQSGVGKSSLINALLPEAEILVGDVSENSGLGQHTTTTARL--YHFPHGG-DLIDSPGVRE 271 (344)
T ss_pred EEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEE--EECCCCC-EEEECCCCCC
T ss_conf 999806876788887610753342232014333886640116899--9928998-7973898765