HHsearch alignment for GI: 254780648 and conserved domain: PRK12312
>PRK12312 infB translation initiation factor IF-2; Provisional.
Probab=99.58 E-value=7.5e-15 Score=109.85 Aligned_cols=150 Identities=21% Similarity=0.338 Sum_probs=103.4
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEE--EECCEEEEEECCCCCCCCCCCCCCCHHHH--HH--HH
Q ss_conf 11244216777530354101454012121100000010266--32986899822642124731167751234--43--33
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIV--KEGYKEFILADIPGIIKNAHQGAGIGDRF--LK--HT 234 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv--~~~~~~~~i~D~PGlIegA~~~~glG~~F--Lr--hI 234 (335)
T Consensus 119 vVtimGHVDHGKTsLLD~iR~t~--V~~~EaGGITQhIGA~~v~~~~~~itFiDTPG-----He------AFt~mR~RGa 185 (610)
T PRK12312 119 IVTIMGHVDHGKTTLLDTIRKTN--VVASEAGGITQHIGAYQVEYQGKKITFIDTPG-----HE------AFTEMRARGA 185 (610)
T ss_pred EEEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEECEEEEEECCCEEEEECCCC-----HH------HHHHHHHCCC
T ss_conf 89996772577225889985486--41346776644004499986797689972896-----79------8999997077
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH------CC--CCEEE
Q ss_conf 33578875202222110134666789987776675059889999746589988999999999986------29--94899
Q gi|254780648|r 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ------CG--QVPFE 306 (335)
Q Consensus 235 er~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~------~~--~~vi~ 306 (335)
T Consensus 186 ~vtDI~iLVVaaddGv~pQTiEaI~~-ak~-----a~vpiiVAiNKiDkp~a~-~~~v~~~L~~~g~~~E~~GGdv~~V~ 258 (610)
T PRK12312 186 KVTDIVILVVAADDGVKPQTEEAIDH-AKA-----ANVPIIVFVNKMDKPNAN-PDRIKNELSKYDLVPEEWGGDTPFVY 258 (610)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHH-HHH-----CCCCEEEEECCCCCCCCC-HHHHHHHHHHHCCCHHHHCCCCEEEE
T ss_conf 65457999997578977426999999-997-----599889985044678898-78999999870766788579445999
Q ss_pred EECCCCCCHHHHHHHHH--HHHHHHH
Q ss_conf 98887889999999999--9998545
Q gi|254780648|r 307 FSSITGHGIPQILECLH--DKIFSIR 330 (335)
Q Consensus 307 ISA~tg~GI~eL~~~I~--e~L~~~r 330 (335)
T Consensus 259 iSAktg~GId~LLe~IlL~AE~leLk 284 (610)
T PRK12312 259 GSALKNEGIDELLDSILLLAEILNLK 284 (610)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 03687989999999999999987652