HHsearch alignment for GI: 254780648 and conserved domain: TIGR01394

>TIGR01394 TypA_BipA GTP-binding protein TypA; InterPro: IPR006298 This bacterial (and Arabidopsis) protein, termed TypA or BipA, is a GTP-binding protein. It is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown.; GO: 0005525 GTP binding, 0005622 intracellular.
Probab=98.23  E-value=7.8e-07  Score=61.26  Aligned_cols=149  Identities=21%  Similarity=0.262  Sum_probs=81.2

Q ss_pred             EEEEECCCCCCCEEEEEECC-------C-CCHHHHHH--HCCCEECCE--------EEEECC----EEEEEECCCCCCCC
Q ss_conf             12442167775303541014-------5-40121211--000000102--------663298----68998226421247
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTR-------A-KPKIADYP--FTTLYPNLG--------IVKEGY----KEFILADIPGIIKN  219 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~-------a-k~kIa~yp--FTT~~P~lG--------vv~~~~----~~~~i~D~PGlIeg  219 (335)
T Consensus         4 IAIIAHVDHGKTTLVD~LL~Qsgf~f~~~~~~~~ER~MDSNDLErERGITILaKNTav~y~g~dG~~~INIvDTPG----   79 (609)
T TIGR01394         4 IAIIAHVDHGKTTLVDALLKQSGFTFRADNEAVAERVMDSNDLERERGITILAKNTAVRYNGKDGVTKINIVDTPG----   79 (609)
T ss_pred             EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCEEEEEEECCCCCEEEEEEEECCC----
T ss_conf             8999880699436898888876588641588321354067652100155201300366252889718997781689----


Q ss_pred             CCCCCCCHHHHHHHHHH----HHHHHHHCCCCCCCHHHHHHHH-HHHHHHHHHHHCCCCEEEEEECCCCCCH--HHHHHH
Q ss_conf             31167751234433333----5788752022221101346667-8998777667505988999974658998--899999
Q gi|254780648|r  220 AHQGAGIGDRFLKHTER----THVLLHIVSALEENVQAAYQCI-LDELSAYNSELRKKIEIVGLSQIDTVDS--DTLARK  292 (335)
Q Consensus       220 A~~~~glG~~FLrhIer----~~vLl~VVD~s~~d~~~~~~~I-~~EL~~y~~~L~~Kp~IIVlNKiDl~~~--e~~~~~  292 (335)
T Consensus        80 -HA------DFGGEVERvL~MVDGvlLlVDA~EG-PMPQTrFVL~KAL~-----~gL-kPIVViNKiDrp~ARP~eV~d~  145 (609)
T TIGR01394        80 -HA------DFGGEVERVLGMVDGVLLLVDASEG-PMPQTRFVLKKALE-----LGL-KPIVVINKIDRPSARPDEVVDE  145 (609)
T ss_pred             -CC------CCCCEEEEECEEEEEEEEEEECCCC-CCCCCHHHHHHHHH-----CCC-CEEEEECCCCCCCCCHHHHHHH
T ss_conf             -88------7886588733024058999857888-98853478999995-----689-3699971347887883788757


Q ss_pred             HHHHHH-------HCCCCEEEEECC---------------CCCCHHHHHHHHHHHHHH
Q ss_conf             999998-------629948999888---------------788999999999999985
Q gi|254780648|r  293 KNELAT-------QCGQVPFEFSSI---------------TGHGIPQILECLHDKIFS  328 (335)
Q Consensus       293 ~~~l~~-------~~~~~vi~ISA~---------------tg~GI~eL~~~I~e~L~~  328 (335)
T Consensus       146 vFDLF~~LgA~deQLDFP~vYASa~~G~A~l~~~~dg~~~~~~~m~PLFd~I~~hvPa  203 (609)
T TIGR01394       146 VFDLFIELGADDEQLDFPIVYASARAGWASLDKDKDGLDDDSEDMAPLFDAILRHVPA  203 (609)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf             8788885388800101256766523672014466577887220178999898640688