HHsearch alignment for GI: 254780648 and conserved domain: TIGR02836
>TIGR02836 spore_IV_A stage IV sporulation protein A; InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis . A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. .
Probab=97.71 E-value=0.00033 Score=45.32 Aligned_cols=162 Identities=22% Similarity=0.266 Sum_probs=99.8
Q ss_pred EEEEECCCCCCCEEEEE---------ECCC--CCHHHH-HH----H---CCCEE----CCEE-EEE---CCEEEEEECCC
Q ss_conf 12442167775303541---------0145--401212-11----0---00000----1026-632---98689982264
Q gi|254780648|r 162 IGIIGLPNAGKSTFLAS---------VTRA--KPKIAD-YP----F---TTLYP----NLGI-VKE---GYKEFILADIP 214 (335)
Q Consensus 162 VglVG~PNaGKSTLln~---------ls~a--k~kIa~-yp----F---TT~~P----~lGv-v~~---~~~~~~i~D~P 214 (335)
T Consensus 20 iGvVGpVRTGKSTfIKkFMeLlvLPNi~n~~~k~Ra~DELPQSaAGktimTTEPKFvPn~Avei~in~~~k~~vRLVDcV 99 (492)
T TIGR02836 20 IGVVGPVRTGKSTFIKKFMELLVLPNIENEYDKERAQDELPQSAAGKTIMTTEPKFVPNEAVEININEGTKFKVRLVDCV 99 (492)
T ss_pred EEEECCCCCCCCCHHHHEEHEEECCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEE
T ss_conf 98662742785211111001022388861111202310688776868021048786688518998648820789999862
Q ss_pred CC-CCCCC----CCCC------C---HHHHH--------HHHHHHHHHHHHC--CCC-----CCCHHHHHHHHHHHHHHH
Q ss_conf 21-24731----1677------5---12344--------3333357887520--222-----211013466678998777
Q gi|254780648|r 215 GI-IKNAH----QGAG------I---GDRFL--------KHTERTHVLLHIV--SAL-----EENVQAAYQCILDELSAY 265 (335)
Q Consensus 215 Gl-IegA~----~~~g------l---G~~FL--------rhIer~~vLl~VV--D~s-----~~d~~~~~~~I~~EL~~y 265 (335)
T Consensus 100 GY~V~GA~GY~ee~kprMv~TPWYd~eIPF~EAAEIGTrKVI~dHSTiG~lvTTDGsI~dI~RedYv~AEERVveELKe- 178 (492)
T TIGR02836 100 GYIVKGALGYEEEDKPRMVSTPWYDEEIPFEEAAEIGTRKVISDHSTIGLLVTTDGSITDIPREDYVEAEERVVEELKE- 178 (492)
T ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC-
T ss_conf 3015785450027864011588888888723551237710115775078997117840346731340033577677640-
Q ss_pred HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 66750598899997465899889999999999862994899988878899999999999998545
Q gi|254780648|r 266 NSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHDKIFSIR 330 (335)
Q Consensus 266 ~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL~~~I~e~L~~~r 330 (335)
T Consensus 179 ----~~KPFIilLNs~~P~~p-ET~~L~~eLe~KYDvpV~~~~v~-~m~~~Di~~vL~~~LyEFP 237 (492)
T TIGR02836 179 ----LNKPFIILLNSTHPLAP-ETKALRKELEEKYDVPVLVVDVL-EMKIKDILSVLEKVLYEFP 237 (492)
T ss_pred ----CCCCEEEEECCCCCCCH-HHHHHHHHHHHHCCCCEEEEECC-CCCHHHHHHHHHHHHHHCC
T ss_conf ----79967999768897886-57999998652088445896400-0244669999998541068