>TIGR03156 GTP_HflX GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like).

Probab=100.00 E-value=5.7e-37 Score=243.95 Aligned_cols=159 Identities=24% Similarity=0.380 Sum_probs=132.9 Q ss_pred EECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEE-CCEEEEEECCCCCCCCCCCCCCCHHHH---HHHH Q ss_conf 301124421677753035410145401212110000001026632-986899822642124731167751234---4333 Q gi|254780648|r 159 IADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRF---LKHT 234 (335) Q Consensus 159 iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~-~~~~~~i~D~PGlIegA~~~~glG~~F---LrhI 234 (335) T Consensus 189 ~p~ValVGYTNAGKSTL~n~Lt~~~~~~~d~lFaTLd~t~r~~~l~~~~~~ll~DTVGFI~~--LP~~Li~aF~sTLee~ 266 (351) T TIGR03156 189 VPTVALVGYTNAGKSTLFNALTGADVYAADQLFATLDPTTRRLDLPDGGEVLLTDTVGFIRD--LPHELVAAFRATLEEV 266 (351) T ss_pred CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCCEEEEEECCCHHHH--CCHHHHHHHHHHHHHH T ss_conf 97699966788778999999851776410343135367320488799976999815005630--8867999999999999 Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC Q ss_conf 33578875202222110134666789987776675059889999746589988999999999986299489998887889 Q gi|254780648|r 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHG 314 (335) Q Consensus 235 er~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~G 314 (335) T Consensus 267 ~~aDlllhVvD~S~~~~~~~~~~v~~~L~el--g~~~~p~i~V~NKiD~~~~~~~~~~----~~~~-~~~v~ISA~~g~g 339 (351) T TIGR03156 267 READLLLHVVDASDPDREEQIEAVEEVLEEL--GAEDIPQLLVYNKIDLLDEPRIERL----EEGY-PEAVFVSAKTGEG 339 (351) T ss_pred HHCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCCCCEEEEEECHHCCCHHHHHHH----HHCC-CCEEEEECCCCCC T ss_conf 8598999980588847899999999999976--9999988999967015895778998----7379-9879996899989 Q ss_pred HHHHHHHHHHHH Q ss_conf 999999999999 Q gi|254780648|r 315 IPQILECLHDKI 326 (335) Q Consensus 315 I~eL~~~I~e~L 326 (335) T Consensus 340 i~~L~~~I~~~L 351 (351) T TIGR03156 340 LDLLLEAIAERL 351 (351) T ss_pred HHHHHHHHHHHC T ss_conf 999999999559

HHsearch alignment for GI: 254780648 and conserved domain: TIGR03156