HHsearch alignment for GI: 254780648 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=95.32 E-value=0.18 Score=28.79 Aligned_cols=47 Identities=26% Similarity=0.263 Sum_probs=32.7
Q ss_pred EEEEEEEEECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEE
Q ss_conf 9999976301124421677753035410145401212110000001026632986899
Q gi|254780648|r 152 IWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFI 209 (335)
Q Consensus 152 ~~lelk~iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~ 209 (335)
T Consensus 484 vsl~i~~Ge~vaIvG~sGsGKSTL~kll~Gl-----------~~p~~G~i~idg~~~~ 530 (694)
T TIGR03375 484 VSLTIRPGEKVAIIGRIGSGKSTLLKLLLGL-----------YQPTEGSVLLDGVDIR 530 (694)
T ss_pred HHHEECCCCEEEEEECCCCCHHHHHHHHCCC-----------CCCCCCEEEECCEECC
T ss_conf 3118879978999805898788999985567-----------5899887998985425