HHsearch alignment for GI: 254780648 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=94.99 E-value=0.25 Score=27.86 Aligned_cols=23 Identities=35% Similarity=0.445 Sum_probs=19.9
Q ss_pred ECEEEEECCCCCCCEEEEEECCC
Q ss_conf 01124421677753035410145
Q gi|254780648|r 160 ADIGIIGLPNAGKSTFLASVTRA 182 (335)
Q Consensus 160 aDVglVG~PNaGKSTLln~ls~a 182 (335)
T Consensus 29 ei~gllGpNGAGKTTl~~~l~Gl 51 (301)
T TIGR03522 29 RIVGFLGPNGAGKSTTMKIITGY 51 (301)
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 19999999998199999999679