HHsearch alignment for GI: 254780648 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=99.96 E-value=7.2e-30 Score=200.90 Aligned_cols=164 Identities=26% Similarity=0.294 Sum_probs=126.5
Q ss_pred CEEEEECCCCCCCEEEEEECCCC-CHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCH----HHHHHHHH
Q ss_conf 11244216777530354101454-01212110000001026632986899822642124731167751----23443333
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIG----DRFLKHTE 235 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak-~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG----~~FLrhIe 235 (335)
T Consensus 174 riaivGrPNvGKSTl~N~ll~~~r~ivs~~~GtTrD~i~~~~~~~~~~~~~iDTaGirkk~k~~~~~e~~s~~~t~~~i~ 253 (429)
T TIGR03594 174 KIAIIGRPNVGKSTLVNALLGEERVIVSDIAGTTRDSIDIPFERNGKKYLLIDTAGIRRKGKVTEGIEKYSVLRTLKAIE 253 (429)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 69997488765467777765433321479998631026879999990899998988763664230477999999999987
Q ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC-HHHHHHHHHHHHHHC----CCCEEEEECC
Q ss_conf 35788752022221101346667899877766750598899997465899-889999999999862----9948999888
Q gi|254780648|r 236 RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD-SDTLARKKNELATQC----GQVPFEFSSI 310 (335)
Q Consensus 236 r~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~-~e~~~~~~~~l~~~~----~~~vi~ISA~ 310 (335)
T Consensus 254 ~~dvvil~iD~~~~~~~qD~~-i~~~i~~-----~~k~~ii~~NK~Dli~~~~~~~~~~~~i~~~l~~~~~~pI~fiSA~ 327 (429)
T TIGR03594 254 RADVVLLVLDATEGITEQDLR-IAGLALE-----AGKALIIVVNKWDLVKDEKTREEFKKELRRKLPFLDFAPIVFISAL 327 (429)
T ss_pred HCCEEEEEEECCCCCCHHHHH-HHHHHHH-----CCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC
T ss_conf 447799999766588488899-9998987-----3997699997223037999999999999985623689868997345
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 78899999999999998545
Q gi|254780648|r 311 TGHGIPQILECLHDKIFSIR 330 (335)
Q Consensus 311 tg~GI~eL~~~I~e~L~~~r 330 (335)
T Consensus 328 ~g~gi~kl~~~i~~~~~~~~ 347 (429)
T TIGR03594 328 TGQGVDKLLDAIDEVYENAN 347 (429)
T ss_pred CCCCHHHHHHHHHHHHHHHH
T ss_conf 77899999999999999972