HHsearch alignment for GI: 254780648 and conserved domain: cd00882

>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.69  E-value=4.6e-17  Score=123.24  Aligned_cols=152  Identities=16%  Similarity=0.137  Sum_probs=105.1

Q ss_pred             EEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEEC--CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             44216777530354101454012121100000010266329--8689982264212473116775123443333357887
Q gi|254780648|r  164 IIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLL  241 (335)
Q Consensus       164 lVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~--~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~vLl  241 (335)
T Consensus         1 vvG~~~~GKSsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~----~---~~~~~~~~~~i   73 (157)
T cd00882           1 VVGDSGVGKTSLLNRLLGGEFVPEEYETTIIDFYSKTIEVDGKKVKLQIWDTAGQERFRSL----R---RLYYRGADGII   73 (157)
T ss_pred             CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHH----H---HHHHHHCCEEE
T ss_conf             9294996889999999719888764687157899999999999999999985895115678----9---99975357999


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH--HHHHHHHCCCCEEEEECCCCCCHHHHH
Q ss_conf             520222211013466678998777667505988999974658998899999--999998629948999888788999999
Q gi|254780648|r  242 HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARK--KNELATQCGQVPFEFSSITGHGIPQIL  319 (335)
Q Consensus       242 ~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~--~~~l~~~~~~~vi~ISA~tg~GI~eL~  319 (335)
T Consensus        74 ~v~d~~~~~s~~~~~~~~~~~~~-~~~~~~~~iiiv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~Sa~~~~~i~~l~  152 (157)
T cd00882          74 LVYDVTDRESFENVKEWLLLILI-NKEGENIPIILVGNKIDLPEERVVSEEELAEQLAKELGVPYFETSAKTGENVEELF  152 (157)
T ss_pred             EEEECCCHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
T ss_conf             99865888889999999999999-75258984999985356154066889999999998789869998478883999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780648|r  320 ECLH  323 (335)
Q Consensus       320 ~~I~  323 (335)
T Consensus       153 ~~i~  156 (157)
T cd00882         153 EELA  156 (157)
T ss_pred             HHHH
T ss_conf             9985