HHsearch alignment for GI: 254780648 and conserved domain: cd01849
>cd01849 YlqF_related_GTPase YlqF-related GTPases. These proteins are found in bacteria, eukaryotes, and archaea. They all exhibit a circular permutation of the GTPase signature motifs so that the order of the conserved G box motifs is G4-G5-G1-G2-G3, with G4 and G5 being permuted from the C-terminal region of proteins in the Ras superfamily to the N-terminus of YlqF-related GTPases.
Probab=98.78 E-value=2.2e-08 Score=70.67 Aligned_cols=88 Identities=22% Similarity=0.235 Sum_probs=65.6
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf 78875202222110134666789987776675059889999746589988999999999986299489998887889999
Q gi|254780648|r 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 (335)
Q Consensus 238 ~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~e 317 (335)
T Consensus 1 D~il~VvDaR~pl~~~~~~-~~~~l~----~~~~K~~ilvlNK~Dl~~~~~~~~w~~~~~~~~~~~~~~~S~~~~~~~~~ 75 (155)
T cd01849 1 DVILEVLDARDPLGTRSPD-IERVLI----KEKGKKLILVLNKADLVPKEVLRKWLAYLRHSYPTIPFKISATNGQGIEK 75 (155)
T ss_pred CEEEEEEECCCCCCCCCHH-HHHHHH----HCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCHHH
T ss_conf 9899999687999988999-999998----65899489997673458989999999999962998516711026745688
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999998545
Q gi|254780648|r 318 ILECLHDKIFSIR 330 (335)
Q Consensus 318 L~~~I~e~L~~~r 330 (335)
T Consensus 76 ~~~~~~~~~~~~~ 88 (155)
T cd01849 76 KESAFTKQTNSNL 88 (155)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999998715666