HHsearch alignment for GI: 254780648 and conserved domain: cd01855
>cd01855 YqeH YqeH. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Probab=98.44 E-value=2.4e-07 Score=64.35 Aligned_cols=89 Identities=12% Similarity=0.198 Sum_probs=57.0
Q ss_pred HHHHHH-HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH-----HC---
Q ss_conf 443333-357887520222211013466678998777667505988999974658998899999999998-----62---
Q gi|254780648|r 230 FLKHTE-RTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELAT-----QC--- 300 (335)
Q Consensus 230 FLrhIe-r~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~-----~~--- 300 (335)
T Consensus 27 ~l~~~~~~~~lVv~VvDi~Df~~-----S~~~~l~~~---~~~~~v~lV~NK~DLLp~~~~~~~~~~~~~~~~~~~~~~~ 98 (190)
T cd01855 27 LLSSISPKKALVVHVVDIFDFPG-----SLIPRLRLF---GGNNPVILVGNKIDLLPKDKNLVRIKNWLRAKAAAGLGLK 98 (190)
T ss_pred HHHHCCCCCCEEEEEEECCCCCC-----CCCHHHHHH---CCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 99852467845999975435764-----446557986---1798689999815517887658888989999975015998
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99489998887889999999999999
Q gi|254780648|r 301 GQVPFEFSSITGHGIPQILECLHDKI 326 (335)
Q Consensus 301 ~~~vi~ISA~tg~GI~eL~~~I~e~L 326 (335)
T Consensus 99 ~~~v~lvSa~~~~gi~~L~~~i~~~~ 124 (190)
T cd01855 99 PKDVILISAKKGWGVEELINAIKKLA 124 (190)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 43179976657869899999999974