HHsearch alignment for GI: 254780648 and conserved domain: cd01876
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=99.97 E-value=2.8e-32 Score=215.48 Aligned_cols=157 Identities=21% Similarity=0.307 Sum_probs=116.6
Q ss_pred CEEEEECCCCCCCEEEEEECCCC--CHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCC-CCCCC-----CCCHHHHHH
Q ss_conf 11244216777530354101454--01212110000001026632986899822642124-73116-----775123443
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAK--PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIK-NAHQG-----AGIGDRFLK 232 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak--~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIe-gA~~~-----~glG~~FLr 232 (335)
T Consensus 1 eIaivG~pN~GKSTL~N~L~~~~~~~~vs~~~gtTr~i~~~~---~~~~~~~vDtPG~g~~~~~~~~~~~~~~~~~~~l~ 77 (170)
T cd01876 1 EIAFAGRSNVGKSSLINALTNRKKLARTSKTPGKTQLINFFN---VNDKFRLVDLPGYGYAKVSKEVKEKWGKLIEEYLE 77 (170)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEEEEEE---ECCEEEEEECCCCHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 989998999999999999968996278607897785205885---38779999657840101687799999999999998
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-----CCCEEEE
Q ss_conf 33335788752022221101346667899877766750598899997465899889999999999862-----9948999
Q gi|254780648|r 233 HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC-----GQVPFEF 307 (335)
Q Consensus 233 hIer~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~-----~~~vi~I 307 (335)
T Consensus 78 ~~~~~~~vi~viD~~~~~~~~d~~-i~~~l~~-----~~kp~iiVlNKiDlv~~~~~~~~~~~~~~~l~~~~~~~~ii~i 151 (170)
T cd01876 78 NRENLKGVVLLIDSRHGPTEIDLE-MLDWLEE-----LGIPFLVVLTKADKLKKSELAKALKEIKKELKLFEIDPPIILF 151 (170)
T ss_pred HHHHHCEEEEEEECCCCCCHHHHH-HHHHHHH-----CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf 406334999999632237486899-9999987-----6998799998675378778999999999987421799839999
Q ss_pred ECCCCCCHHHHHHHHHHHH
Q ss_conf 8887889999999999999
Q gi|254780648|r 308 SSITGHGIPQILECLHDKI 326 (335)
Q Consensus 308 SA~tg~GI~eL~~~I~e~L 326 (335)
T Consensus 152 SA~~g~gi~~L~~~I~~~L 170 (170)
T cd01876 152 SSLKGQGIDELRALIEKWL 170 (170)
T ss_pred ECCCCCCHHHHHHHHHHHC
T ss_conf 8899977999999999859