>cd01893 Miro1 Miro1 subfamily. Miro (mitochondrial Rho) proteins have tandem GTP-binding domains separated by a linker region containing putative calcium-binding EF hand motifs. Genes encoding Miro-like proteins were found in several eukaryotic organisms. This CD represents the N-terminal GTPase domain of Miro proteins. These atypical Rho GTPases have roles in mitochondrial homeostasis and apoptosis. Most Rho proteins contain a lipid modification site at the C-terminus; however, Miro is one of few Rho subfamilies that lack this feature.

Probab=99.55 E-value=1e-14 Score=109.04 Aligned_cols=154 Identities=14% Similarity=0.068 Sum_probs=100.8 Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEEC--CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH Q ss_conf 1244216777530354101454012121100000010266329--86899822642124731167751234433333578 Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG--YKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 (335) Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~--~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~v 239 (335) T Consensus 3 iv~vGd~~VGKTsli~r~~~~~F-~~~~~-~t~~~~~~~~~~~~~~v~l~i~DtaG~e~----~~~~~~~---~~~~a~~ 73 (166) T cd01893 3 IVLIGDEGVGKSSLIMSLVSEEF-PENVP-RVLPEITIPADVTPERVPTTIVDTSSRPQ----DRANLAA---EIRKANV 73 (166) T ss_pred EEEECCCCCCHHHHHHHHHHCCC-CCCCC-CCCCCEEEEEEECCEEEEEEEEECCCCCC----CCHHHHH---HHCCCCE T ss_conf 99999999899999999984978-88777-63456899999889099999998998723----0245798---7368988 Q ss_pred HHHHCCCCCCCHHHHHH-HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH---HHHHHHHHHCC--CCEEEEECCCCC Q ss_conf 87520222211013466-6789987776675059889999746589988999---99999998629--948999888788 Q gi|254780648|r 240 LLHIVSALEENVQAAYQ-CILDELSAYNSELRKKIEIVGLSQIDTVDSDTLA---RKKNELATQCG--QVPFEFSSITGH 313 (335) Q Consensus 240 Ll~VVD~s~~d~~~~~~-~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~---~~~~~l~~~~~--~~vi~ISA~tg~ 313 (335) T Consensus 74 ~ilvydit~~~Sf~~i~~~w~~~i~~~~~---~~piilvGNK~DL~~~r~~~~~e~~~~~~~~~~~~~~~~~EtSAktg~ 150 (166) T cd01893 74 ICLVYSVDRPSTLERIRTKWLPLIRRLGV---KVPIILVGNKSDLRDGSSQAGLEEEMLPIMNEFREIETCVECSAKTLI 150 (166) T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC T ss_conf 99997089877899999999999998689---996899998865400250335889999999973074889990658891 Q ss_pred CHHHHHHHHHHHHH Q ss_conf 99999999999998 Q gi|254780648|r 314 GIPQILECLHDKIF 327 (335) Q Consensus 314 GI~eL~~~I~e~L~ 327 (335) T Consensus 151 nV~e~F~~~~k~~l 164 (166) T cd01893 151 NVSEVFYYAQKAVL 164 (166) T ss_pred CHHHHHHHHHHHHH T ss_conf 98999999999980

HHsearch alignment for GI: 254780648 and conserved domain: cd01893