>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=100.00 E-value=3.7e-37 Score=245.12 Aligned_cols=160 Identities=24% Similarity=0.387 Sum_probs=127.2 Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCC----HHHHHHHHHH Q ss_conf 112442167775303541014540121211000000102663298689982264212473116775----1234433333 Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGI----GDRFLKHTER 236 (335) Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~gl----G~~FLrhIer 236 (335) T Consensus 2 ~VaivG~pNvGKStL~N~L~g~~~~v~~~p~TTr~~~~~~~~~~~~~~~liDTpGi~~~~~~~~~~ie~~~~~~l~~~-- 79 (168) T cd01897 2 TLVIAGYPNVGKSSLVNKLTRAKPEVAPYPFTTKSLFVGHFDYKYLRWQVIDTPGLLDRPLEERNTIEMQAITALAHL-- 79 (168) T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC-- T ss_conf 799988999889999999958986023758723574368999837276872488655674788889999999999835-- Q ss_pred HHHHHHHCCCCCCC--HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC Q ss_conf 57887520222211--0134666789987776675059889999746589988999999999986299489998887889 Q gi|254780648|r 237 THVLLHIVSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHG 314 (335) Q Consensus 237 ~~vLl~VVD~s~~d--~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~G 314 (335) T Consensus 80 ~d~il~viD~~~~~~~~~~~~~~l~~~i~~---~~~~~p~i~v~NK~Dl~~~~~~~~~~~-~~~~~~~~vi~ISA~~g~G 155 (168) T cd01897 80 RAAVLFLFDPSETCGYSLEEQLSLFEEIKP---LFKNKPVIVVLNKIDLLTFEDLSEIEE-EEELEGEEVLKISTLTEEG 155 (168) T ss_pred CCEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEEEECCCCCCCCCHHHHHH-HHHCCCCCEEEEECCCCCC T ss_conf 776899996887678489999999998776---525888799994753458100799999-9970899889998158969 Q ss_pred HHHHHHHHHHHH Q ss_conf 999999999999 Q gi|254780648|r 315 IPQILECLHDKI 326 (335) Q Consensus 315 I~eL~~~I~e~L 326 (335) T Consensus 156 i~~L~~~i~ell 167 (168) T cd01897 156 VDEVKNKACELL 167 (168) T ss_pred HHHHHHHHHHHC T ss_conf 999999999963

HHsearch alignment for GI: 254780648 and conserved domain: cd01897