HHsearch alignment for GI: 254780648 and conserved domain: cd03116
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=95.99 E-value=0.0012 Score=41.97 Aligned_cols=46 Identities=28% Similarity=0.534 Sum_probs=35.1
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCC
Q ss_conf 1244216777530354101454012121100000010266329868998226421
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGl 216 (335)
T Consensus 4 i~ivG~snSGKTTLi~kli~~--------l~~~G~~V~~iKH~~H~f~-~D~~Gk 49 (159)
T cd03116 4 IGFVGYSGSGKTTLLEKLIPA--------LSARGLRVAVIKHDHHDFD-IDTPGK 49 (159)
T ss_pred EEEEECCCCCHHHHHHHHHHH--------HHHCCCEEEEEEECCCCCC-CCCCCC
T ss_conf 999967999999999999999--------9977985989973476777-778984