HHsearch alignment for GI: 254780648 and conserved domain: cd03225
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=95.25 E-value=0.056 Score=31.81 Aligned_cols=33 Identities=30% Similarity=0.254 Sum_probs=26.0
Q ss_pred EEEEEEEEEEECEEEEECCCCCCCEEEEEECCC
Q ss_conf 689999976301124421677753035410145
Q gi|254780648|r 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRA 182 (335)
Q Consensus 150 ~~~~lelk~iaDVglVG~PNaGKSTLln~ls~a 182 (335)
T Consensus 18 ~~vsl~i~~Gei~~iiG~nGaGKSTLlk~i~Gl 50 (211)
T cd03225 18 DDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGL 50 (211)
T ss_pred EEEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 531788849979999889999899999999646