HHsearch alignment for GI: 254780648 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=95.04 E-value=0.28 Score=27.59 Aligned_cols=47 Identities=26% Similarity=0.260 Sum_probs=33.6
Q ss_pred EEEEEEEEEEEECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCE
Q ss_conf 2689999976301124421677753035410145401212110000001026632986
Q gi|254780648|r 149 EKIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK 206 (335)
Q Consensus 149 ~~~~~lelk~iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~ 206 (335)
T Consensus 20 L~~isl~i~~G~~v~ivG~sGsGKSTLl~ll~gl-----------~~p~~G~I~i~g~ 66 (220)
T cd03245 20 LDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGL-----------YKPTSGSVLLDGT 66 (220)
T ss_pred EECEEEEECCCCEEEEECCCCCHHHHHHHHHHCC-----------CCCCCCEEEECCE
T ss_conf 5345999879999999999998599999999672-----------5478658999999