HHsearch alignment for GI: 254780648 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=95.56 E-value=0.078 Score=30.95 Aligned_cols=47 Identities=26% Similarity=0.260 Sum_probs=33.3
Q ss_pred EEEEEEEEEEECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEE
Q ss_conf 6899999763011244216777530354101454012121100000010266329868
Q gi|254780648|r 150 KIIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKE 207 (335)
Q Consensus 150 ~~~~lelk~iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~ 207 (335)
T Consensus 21 ~~isl~i~~Ge~~~iiG~sGsGKTTll~~i~Gl-----------~~p~~G~I~~~g~~ 67 (218)
T cd03255 21 KGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGL-----------DRPTSGEVRVDGTD 67 (218)
T ss_pred ECEEEEECCCCEEEEECCCCCHHHHHHHHHHCC-----------CCCCCEEEEECCEE
T ss_conf 562899869989999999998699999999669-----------99996499999999