HHsearch alignment for GI: 254780648 and conserved domain: cd03296
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.79 E-value=0.035 Score=33.07 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=32.9
Q ss_pred EEEEEEEEEECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEE
Q ss_conf 8999997630112442167775303541014540121211000000102663298689
Q gi|254780648|r 151 IIWLKLKLIADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEF 208 (335)
Q Consensus 151 ~~~lelk~iaDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~ 208 (335)
T Consensus 20 ~is~~v~~Ge~~~iiGpSGsGKSTll~~i~Gl-----------~~p~~G~I~~~g~~i 66 (239)
T cd03296 20 DVSLDIPSGELVALLGPSGSGKTTLLRLIAGL-----------ERPDSGTILFGGEDA 66 (239)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHHHHHHCC-----------CCCCCEEEEECCEEC
T ss_conf 63869889989999999997799999999769-----------999863999999999