HHsearch alignment for GI: 254780648 and conserved domain: cd04138
>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=99.62 E-value=5.3e-16 Score=116.84 Aligned_cols=155 Identities=14% Similarity=0.143 Sum_probs=106.3
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECC-EEEEECC--EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1244216777530354101454012121100000010-2663298--689982264212473116775123443333357
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~l-Gvv~~~~--~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~ 238 (335)
T Consensus 4 vvlvGd~~VGKTsli~r~~~~~F-~~~y~-~Ti~~~~~k~~~i~~~~~~l~iwDtaG~e~----~~~l~~~---~~~~a~ 74 (162)
T cd04138 4 LVVVGAGGVGKSALTIQLIQNHF-VDEYD-PTIEDSYRKQVVIDGETCLLDILDTAGQEE----YSAMRDQ---YMRTGE 74 (162)
T ss_pred EEEECCCCCCHHHHHHHHHHCCC-CCCCC-CCCCCEEEEEEEECCEEEEEEEEECCCCCC----CCHHHHH---HHCCCC
T ss_conf 99989999889999999983928-87568-855527999999999999999997998601----1147898---715787
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf 88752022221101346667899877766750598899997465899889999999999862994899988878899999
Q gi|254780648|r 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 (335)
Q Consensus 239 vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL 318 (335)
T Consensus 75 ~~ilvydvt~~~Sf~~v~~w~~~i~~~~~-~~~~piilVgNK~Dl~~r~V~~~e~~~~a~~~~~~f~E~SAk~~~nV~e~ 153 (162)
T cd04138 75 GFLCVFAINSRKSFEDIHTYREQIKRVKD-SDDVPMVLVGNKCDLAARTVSSRQGQDLAKSYGIPYIETSAKTRQGVEEA 153 (162)
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEECCHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH
T ss_conf 79999617988999989999999998548-88854999976535645558899999999980998999738998598999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780648|r 319 LECLHDKI 326 (335)
Q Consensus 319 ~~~I~e~L 326 (335)
T Consensus 154 F~~l~~~I 161 (162)
T cd04138 154 FYTLVREI 161 (162)
T ss_pred HHHHHHHC
T ss_conf 99999963