HHsearch alignment for GI: 254780648 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.59 E-value=4.1e-15 Score=111.43 Aligned_cols=156 Identities=13% Similarity=0.048 Sum_probs=106.4
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCE--EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 124421677753035410145401212110000001026632986--899822642124731167751234433333578
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK--EFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~--~~~i~D~PGlIegA~~~~glG~~FLrhIer~~v 239 (335)
T Consensus 5 iv~lGd~~VGKTsli~r~~~~~f-~~~y~~Ti~~~~~k~~~~~~~~~~l~iwDtaG~e~----~~~~~~~---~~~~a~~ 76 (164)
T cd04145 5 LVVVGGGGVGKSALTIQFIQSYF-VTDYDPTIEDSYTKQCEIDGQWAILDILDTAGQEE----FSAMREQ---YMRTGEG 76 (164)
T ss_pred EEEECCCCCCHHHHHHHHHCCCC-CCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCC----CCHHHHH---HHCCCCC
T ss_conf 99999999788999999980989-87567841358999999999999999998988603----1256798---7346787
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-HHHHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf 8752022221101346667899877766750598899997465899889-999999999862994899988878899999
Q gi|254780648|r 240 LLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDT-LARKKNELATQCGQVPFEFSSITGHGIPQI 318 (335)
Q Consensus 240 Ll~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~-~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL 318 (335)
T Consensus 77 ~ilvydi~~~~Sf~~~~~~~~~i~~~~~-~~~~piilVgNK~DL~~~r~Vs~~e~~~~a~~~~~~~~E~SAk~~~nV~e~ 155 (164)
T cd04145 77 FLLVFSVTDRGSFEEVDKFHTQILRVKD-RDEFPMILVGNKADLEHQRKVSREEGQELARKLKIPYIETSAKDRLNVDKA 155 (164)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHCC-CCCCCEEEECCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHH
T ss_conf 4689856735439999999999998618-877752653034573540889999999999981998999854868277999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780648|r 319 LECLHDKI 326 (335)
Q Consensus 319 ~~~I~e~L 326 (335)
T Consensus 156 F~~l~~~I 163 (164)
T cd04145 156 FHDLVRVI 163 (164)
T ss_pred HHHHHHHH
T ss_conf 99999975