HHsearch alignment for GI: 254780648 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=99.83 E-value=2.4e-20 Score=143.18 Aligned_cols=154 Identities=18% Similarity=0.167 Sum_probs=105.1
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 11244216777530354101454012121100000010266329868998226421247311677512344333335788
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVL 240 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~vL 240 (335)
T Consensus 1 ~I~llG~~~~GKTsll~~~~~~~f-~~~~-~pTig~~~~~i~~~~~~l~iwDt~G~e----~~~~l~---~~y~~~~~~i 71 (159)
T cd04159 1 EITLVGLQNSGKTTLVNVIAGGQF-SEDT-IPTVGFNMRKVTKGNVTLKVWDLGGQP----RFRSMW---ERYCRGVNAI 71 (159)
T ss_pred CEEEECCCCCCHHHHHHHHHCCCC-CCCC-CCCCCEEEEEEEECCEEEEEEECCCHH----HHHHHH---HHHHCCCCEE
T ss_conf 989999999869999999975999-8861-673250589999899999999798358----779999---9874686368
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH----HHHHCCCCEEEEECCCCCCHH
Q ss_conf 7520222211013466678998777667505988999974658998899999999----998629948999888788999
Q gi|254780648|r 241 LHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNE----LATQCGQVPFEFSSITGHGIP 316 (335)
Q Consensus 241 l~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~----l~~~~~~~vi~ISA~tg~GI~ 316 (335)
T Consensus 72 i~V~D~sd~~s~~~~~~~l~~~~~-~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~~~~~~~~~~~~~~~~SAktg~gI~ 150 (159)
T cd04159 72 VYVVDAADRTALEAAKNELHDLLE-KPSLEGIPLLVLGNKNDLPGALSVDELIEQMNLKSITDREVSCYSISCKEKTNID 150 (159)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
T ss_conf 751577878899999999999985-4434898289888356764347899999999999873499879999796896989
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780648|r 317 QILECLHD 324 (335)
Q Consensus 317 eL~~~I~e 324 (335)
T Consensus 151 e~f~wL~~ 158 (159)
T cd04159 151 IVLDWLIK 158 (159)
T ss_pred HHHHHHHC
T ss_conf 99999965