>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=99.45 E-value=8e-13 Score=97.58 Aligned_cols=145 Identities=22% Similarity=0.308 Sum_probs=90.6 Q ss_pred EEEEECCCCCCCEEEEEECCCC---------CH---------------HHH--HHHCCC----EEC--------CEEEEE Q ss_conf 1244216777530354101454---------01---------------212--110000----001--------026632 Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAK---------PK---------------IAD--YPFTTL----YPN--------LGIVKE 203 (335) Q Consensus 162 VglVG~PNaGKSTLln~ls~ak---------~k---------------Ia~--ypFTT~----~P~--------lGvv~~ 203 (335) T Consensus 2 v~v~GhVD~GKSTL~G~Lt~g~lDdGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~~~~~~~~~~~~ 81 (224) T cd04165 2 VAVVGNVDAGKSTLLGVLTQGELDNGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNHLSESDIEICEK 81 (224) T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEECC T ss_conf 89994858848899999856774222106777877618999726544115655401014532021347654422012136 Q ss_pred CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH------HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE Q ss_conf 9868998226421247311677512344333335------7887520222211013466678998777667505988999 Q gi|254780648|r 204 GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERT------HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVG 277 (335) Q Consensus 204 ~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~------~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIV 277 (335) T Consensus 82 ~~k~it~iD~pG-----H------~~y~kt~i~G~~~~~~d~~~LvV~A~~G~~----~~T~ehl~l--~~~l~ip~~vv 144 (224) T cd04165 82 SSKLVTFIDLAG-----H------ERYLKTTLFGLTGYAPDYAMLVVAANAGII----GMTKEHLGL--ALALNIPVFVV 144 (224) T ss_pred CCCEEEEEECCC-----H------HHHHHHHHHHHHCCCCCEEEEEEECCCCCH----HHHHHHHHH--HHHHCCCEEEE T ss_conf 786799997887-----3------999999998763556898999931788977----999999999--99839998999 Q ss_pred EECCCCCCHHHHHHHHHHHHHHC-----------------------------CCCEEEEECCCCCCHHHHHHHHH Q ss_conf 97465899889999999999862-----------------------------99489998887889999999999 Q gi|254780648|r 278 LSQIDTVDSDTLARKKNELATQC-----------------------------GQVPFEFSSITGHGIPQILECLH 323 (335) Q Consensus 278 lNKiDl~~~e~~~~~~~~l~~~~-----------------------------~~~vi~ISA~tg~GI~eL~~~I~ 323 (335) T Consensus 145 itKiDl~~~~~l~~~~~~i~~~lk~p~~~k~p~~v~~~~d~~~~a~~~~~~~ivPIf~vS~VtG~Gi~~L~~fL~ 219 (224) T cd04165 145 VTKIDLAPANILQETLKDLKRILKVPGVRKLPVPVKSDDDVVLAASNFSSERIVPIFQVSNVTGEGLDLLHAFLN 219 (224) T ss_pred EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHH T ss_conf 989776898999999999999970447556870216858899998648867774679976589879999999998

HHsearch alignment for GI: 254780648 and conserved domain: cd04165