HHsearch alignment for GI: 254780648 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.74 E-value=8.9e-18 Score=127.58 Aligned_cols=155 Identities=16% Similarity=0.146 Sum_probs=106.6
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEE--CCEEEEECC--EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 12442167775303541014540121211000000--102663298--68998226421247311677512344333335
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYP--NLGIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTERT 237 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P--~lGvv~~~~--~~~~i~D~PGlIegA~~~~glG~~FLrhIer~ 237 (335)
T Consensus 2 i~vvG~~~vGKTsli~r~~~~~f-~~~~~-~t~~~~~~~~~~~~~~~~~~~~i~Dt~G~-e~~---~~~~~~---~~~~a 72 (162)
T pfam00071 2 LVLVGDGGVGKSSLLIRFTQNKF-PEEYI-PTIGVDFYTKTIEVDGKTVKLQIWDTAGQ-ERF---RALRPL---YYRGA 72 (162)
T ss_pred EEEECCCCCCHHHHHHHHHHCCC-CCCCC-CCCEEEEEEEEEEECCEEEEEEEEECCCC-HHH---HHHHHH---HHCCC
T ss_conf 89999799779999999961999-98747-74135567899999999999999978987-204---678899---86257
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH-HHHHHHHHHHCCCCEEEEECCCCCCHH
Q ss_conf 7887520222211013466678998777667505988999974658998899-999999998629948999888788999
Q gi|254780648|r 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKNELATQCGQVPFEFSSITGHGIP 316 (335)
Q Consensus 238 ~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~-~~~~~~l~~~~~~~vi~ISA~tg~GI~ 316 (335)
T Consensus 73 d~~iivfd~~~~~S~~~i~~~~~~i~~~~~--~~~piilvgnK~Dl~~~~~i~~~e~~~~a~~~~~~y~e~Sak~g~gI~ 150 (162)
T pfam00071 73 QGFLLVYDITSRDSFENVKKWLEEILRHAD--DNVPIVLVGNKCDLEDQRVVSTEEGEALAKELGLPFMETSAKTNENVE 150 (162)
T ss_pred CCCEEECCCCCHHHHHHHHHHHHHHHHHCC--CCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHH
T ss_conf 655042348988999999999999998579--886288997524746518899999999999809979997378882999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999998
Q gi|254780648|r 317 QILECLHDKIF 327 (335)
Q Consensus 317 eL~~~I~e~L~ 327 (335)
T Consensus 151 ~~F~~i~~~il 161 (162)
T pfam00071 151 EAFEELAREIL 161 (162)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999967