HHsearch alignment for GI: 254780648 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=99.58 E-value=8.1e-15 Score=109.65 Aligned_cols=154 Identities=19% Similarity=0.173 Sum_probs=102.2
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECC-EEEEECC--EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1244216777530354101454012121100000010-2663298--689982264212473116775123443333357
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNL-GIVKEGY--KEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~l-Gvv~~~~--~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~ 238 (335)
T Consensus 1 ivllGd~~VGKTsli~r~~~~~f-~~~y~-~Ti~~~~~~~~~~~~~~~~l~i~DtaG~e~----~~~l~~~---~~~~a~ 71 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYTTNAF-PEDYV-PTVFENYSADVEVDGKPVELGLWDTAGQED----YDRLRPL---SYPDTD 71 (174)
T ss_pred EEEECCCCCCHHHHHHHHHHCCC-CCCCC-CCEEEEEEEEEEECCEEEEEEEEECCCCCC----CCCCCHH---HCCCCC
T ss_conf 59989789759999999953989-99857-850578999999999999999994898703----4545001---104886
Q ss_pred HHHHHCCCCCCCHHHHHHH-HHHHHHHHHHHHCCCCEEEEEECCCCCCHHH-------------HHHHHHHHHHHCC-CC
Q ss_conf 8875202222110134666-7899877766750598899997465899889-------------9999999998629-94
Q gi|254780648|r 239 VLLHIVSALEENVQAAYQC-ILDELSAYNSELRKKIEIVGLSQIDTVDSDT-------------LARKKNELATQCG-QV 303 (335)
Q Consensus 239 vLl~VVD~s~~d~~~~~~~-I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~-------------~~~~~~~l~~~~~-~~ 303 (335)
T Consensus 72 ~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~---~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~a~~~~~~~ 148 (174)
T smart00174 72 VFLICFSVDSPASFENVKEKWYPEVKHFCP---NTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEALAKRIGAVK 148 (174)
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCE
T ss_conf 899997589878999999989999998688---98699998754250123335455331465002999999999839978
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 899988878899999999999998
Q gi|254780648|r 304 PFEFSSITGHGIPQILECLHDKIF 327 (335)
Q Consensus 304 vi~ISA~tg~GI~eL~~~I~e~L~ 327 (335)
T Consensus 149 y~EtSAk~g~nV~e~F~~l~r~~l 172 (174)
T smart00174 149 YLECSALTQEGVREVFEEAIRAAL 172 (174)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 999645889498999999999972