HHsearch alignment for GI: 254780648 and conserved domain: smart00178
>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=99.77 E-value=6.6e-19 Score=134.43 Aligned_cols=154 Identities=21% Similarity=0.190 Sum_probs=106.5
Q ss_pred ECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 01124421677753035410145401212110000001026632986899822642124731167751234433333578
Q gi|254780648|r 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHV 239 (335)
Q Consensus 160 aDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~v 239 (335)
T Consensus 18 ~~ililGLd~aGKTTil~~lk~~~~~-~~--~PT~g~~~e~~~~~~~~~~~wDlgG~----~~~R~lW~---~Yy~~~~~ 87 (184)
T smart00178 18 AKILFLGLDNAGKTTLLHMLKNDRLA-QH--QPTQHPTSEELAIGNIKFTTFDLGGH----QQARRLWK---DYFPEVNG 87 (184)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCC-CC--CCCCCCCEEEEEECCEEEEEEECCCC----HHHHHHHH---HHHCCCCE
T ss_conf 47999965889889999998069975-30--57878864899999999999988987----77889999---88216758
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHH--HHHHCCCCEEEEEECCCCCCHHHHHHHHHHH-----HH------HCCCCEEE
Q ss_conf 87520222211013466678998777--6675059889999746589988999999999-----98------62994899
Q gi|254780648|r 240 LLHIVSALEENVQAAYQCILDELSAY--NSELRKKIEIVGLSQIDTVDSDTLARKKNEL-----AT------QCGQVPFE 306 (335)
Q Consensus 240 Ll~VVD~s~~d~~~~~~~I~~EL~~y--~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l-----~~------~~~~~vi~ 306 (335)
T Consensus 88 iIfVVDssD~~r~~ea---k~~L~~ll~~~~l~~~PlLilaNKqDl~~a~~~~ei~~~L~L~~~~~~~~~~~~r~~~i~~ 164 (184)
T smart00178 88 IVYLVDAYDKERFAES---KRELDALLSDEELATVPFLILGNKIDAPYAASEDELRYALGLTNTTGSKGKVGVRPLEVFM 164 (184)
T ss_pred EEEEEECCCHHHHHHH---HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEEE
T ss_conf 9999726868899999---9999998646765597099999756777899999999881951232655766776319997
Q ss_pred EECCCCCCHHHHHHHHHHHH
Q ss_conf 98887889999999999999
Q gi|254780648|r 307 FSSITGHGIPQILECLHDKI 326 (335)
Q Consensus 307 ISA~tg~GI~eL~~~I~e~L 326 (335)
T Consensus 165 ~SA~tG~Gl~egl~WLs~~i 184 (184)
T smart00178 165 CSVVRRMGYGEGFKWLSQYI 184 (184)
T ss_pred EECCCCCCHHHHHHHHHHHC
T ss_conf 35607978699999998409