HHsearch alignment for GI: 254780649 and conserved domain: TIGR01510
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase; InterPro: IPR001980 Temperature-sensitive mutants of Escherichia coli, defective in the transfer of 3-deoxy-D-manno-octulosonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A, have been used to map KDO transferase activity on the E. coli chromosome . The KDO transferase gene, designated kdtA, was shown to code for a 43kDa polypeptide. Overexpression of this single gene product greatly stimulates incorporation of two stereochemically distinct KDO residues during lipopolysaccharide biosynthesis in extracts of E. coli . From these experiments this protein was thought to play a role in lipopolysaccharide biosynthesis, however now it is annotated as phosphopantetheine adenylyltransferase (2.7.7.3 from EC), which catalyses the reversible transfer of an adenylyl group from ATP to 4'-phosphopantetheine to give dephospho-CoA (DPCOA) and pyrophosphate in the fourth (and penultimate) step of coenzyme A biosynthesis .; GO: 0004595 pantetheine-phosphate adenylyltransferase activity, 0015937 coenzyme A biosynthetic process.
Probab=99.72 E-value=8.3e-18 Score=123.07 Aligned_cols=140 Identities=21% Similarity=0.395 Sum_probs=97.7
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CC----CCCCCCHHHHHH
Q ss_conf 9982778971338999999999986299889999758998755566889999999986310-47----532134255310
Q gi|254780649|r 22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KN----PRIRITAFEAYL 96 (216)
Q Consensus 22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~----~~i~v~~~E~~~ 96 (216)
T Consensus 1 ~A~YPGSFDP~T~GHLDiikRa~~lF--DeV~Vav~-~N~~K~--~~f~~eeR~~~~~~~tk~~l~~~~NV~V~~f~~~L 75 (163)
T TIGR01510 1 IALYPGSFDPITNGHLDIIKRALKLF--DEVIVAVA-INPSKK--PLFSLEERVELIEDATKKHLKKIPNVEVDVFDGRL 75 (163)
T ss_pred CEECCCCCCCCCCCHHHHHHHHHHHC--CEEEEEEE-ECCCCC--CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE
T ss_conf 95548889987436388999998622--17778888-748898--56898999999999999972369814898406712
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEC-CCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHH
Q ss_conf 0032899999972013678438961-688135777776199999758989993899871432158999986325881233
Q gi|254780649|r 97 NHTETFHTILQVKKHNKSVNFVWIM-GADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLS 175 (216)
Q Consensus 97 ~~syT~dtL~~lk~~~p~~~l~fii-G~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~ 175 (216)
T Consensus 76 ----~Vd~A---k~~--~a--~~ivRGlR~~~DFEY----E~------------------------~~~~~N~~La~ei- 115 (163)
T TIGR01510 76 ----LVDYA---KEL--GA--TFIVRGLRAVTDFEY----EL------------------------QMALMNQKLAPEI- 115 (163)
T ss_pred ----EEEEH---HHC--CC--EEEEEECCCCCHHHH----HH------------------------HHHHHHHHHCCCC-
T ss_conf ----12101---366--87--089860147660789----99------------------------9999999755798-
Q ss_pred HHHHHCCCCEEEEEEC-CCCCCCHHHHHHHHH---CCCCCCCC
Q ss_conf 4542058980999807-468868899999998---79685111
Q gi|254780649|r 176 HILCTTSPPSWLFIHD-RHHIISSTAIRKKII---EQDNTRTL 214 (216)
Q Consensus 176 ~~~~~~~~~~~~~i~~-~~~~ISST~IR~~l~---~~~~i~~L 214 (216)
T Consensus 116 --------eTVFL~~~~~~~~~SSs~Vke~~~PeG~ggDv~~~ 150 (163)
T TIGR01510 116 --------ETVFLMASPEYAAVSSSLVKEIASPEGFGGDVSNL 150 (163)
T ss_pred --------CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHC
T ss_conf --------68972787223666767888750779887881012