HHsearch alignment for GI: 254780649 and conserved domain: cd00517

>cd00517 ATPS ATP-sulfurylase (ATPS), also known as sulfate adenylate transferase, catalyzes the transfer of an adenylyl group from ATP to sulfate, forming adenosine 5'-phosphosulfate (APS). This reaction is generally accompanied by a further reaction, catalyzed by APS kinase, in which APS is phosphorylated to yield 3'-phospho-APS (PAPS). In some organisms the APS kinase is a separate protein, while in others it is incorporated with ATP sulfurylase in a bifunctional enzyme that catalyzes both reactions. In bifunctional proteins, the domain that performs the kinase activity can be attached at the N-terminal end of the sulfurylase unit or at the C-terminal end, depending on the organism. While the reaction is ubiquitous among organisms, the physiological role of the reaction varies. In some organisms it is used to generate APS from sulfate and ATP, while in others it proceeds in the opposite direction to generate ATP from APS and pyrophosphate. ATP sulfurylase can be a monomer, a hom
Probab=97.84  E-value=0.00045  Score=43.85  Aligned_cols=153  Identities=18%  Similarity=0.227  Sum_probs=79.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC----CCCCCCHHHHHH---HHH
Q ss_conf             8971338999999999986299-88999975899875556688999999998631047----532134255310---003
Q gi|254780649|r   28 NFNPPHHGHIEIAQIAIKKLNL-DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN----PRIRITAFEAYL---NHT   99 (216)
Q Consensus        28 SFdPiH~gHl~ia~~~~~~l~l-d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~----~~i~v~~~E~~~---~~s   99 (216)
T Consensus       164 TRNp~HraHe~l~~~Ale~~~~~~~lli~P~-vG~~k--~gD~~~~~r~~~y~~l~~~y~p~~~~~l~~~p~~mryAGPr  240 (356)
T cd00517         164 TRNPMHRAHEELMKRALERLLENDGLLLHPL-VGWTK--PGDVPDEVRMRAYEALLEEYYLPERTVLAILPLAMRYAGPR  240 (356)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC-CCCCC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHH
T ss_conf             1899974799999999997143871899733-36788--88989899999999999706898608998424543555558


Q ss_pred             HHHHHHHHHHCCCCCCCEEEECCCCCHH-----HHHHHHHHHHHHHHC-----CEEEEECCCCCHHHHCCHHHHHHHHCC
Q ss_conf             2899999972013678438961688135-----777776199999758-----989993899871432158999986325
Q gi|254780649|r  100 ETFHTILQVKKHNKSVNFVWIMGADNIK-----SFHQWHHWKRIVTTV-----PIAIIDRFDVTFNYISSPMAKTFEYAR  169 (216)
Q Consensus       100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~-----~l~~W~~~~~ll~~~-----~iiV~~R~g~~~~~~~~~~~~~~~~~~  169 (216)
T Consensus       241 EA--l~hAiiRkN~Gct-hfiVGRDHAG~g~~~~fY~~y~aq~i~~~~~~~~l~I~~v~~~~~~-----------Y----  302 (356)
T cd00517         241 EA--LWHAIIRKNYGAT-HFIVGRDHAGVGHPEDYYGPYDAQEIFKKYPMGELGIEPVPFREAA-----------Y----  302 (356)
T ss_pred             HH--HHHHHHHHHCCCC-EEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE-----------E----
T ss_conf             89--9999999976996-5887676678888757788415689998548667863799766369-----------9----


Q ss_pred             CCHHHHHHHHHCCCCEEEEEE------CCCCCCCHHHHHHHHHCCCCC
Q ss_conf             881233454205898099980------746886889999999879685
Q gi|254780649|r  170 LDESLSHILCTTSPPSWLFIH------DRHHIISSTAIRKKIIEQDNT  211 (216)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~i~------~~~~~ISST~IR~~l~~~~~i  211 (216)
T Consensus       303 ---------c~~c-~~~~~~~~cph~~~~~~~iSGt~iR~~L~~G~~p  340 (356)
T cd00517         303 ---------CPKC-LGMVFADTCPHHKEDFLNISGTKMREMLREGEKP  340 (356)
T ss_pred             ---------ECCC-CEEEECCCCCCCCCCEEECCHHHHHHHHHCCCCC
T ss_conf             ---------8677-9188766679997745851789999999776989