HHsearch alignment for GI: 254780649 and conserved domain: cd02064
>cd02064 Flavokinase_C Riboflavin kinase (Flavokinase). This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein riboflavin kinase / FAD synthetase. These enzymes have both ATP:riboflavin. 5'-phospho transferase and ATP:FMN-adenylyltransferase activities . The C-terminal domain has FMN-adenylyltransferase activitie. They catalyse the 5'-phosphorylation of riboflavin to FMN and the adenylylation of FMN to FAD . A domain has been identified in the N-terminal region that is well conserved in all the bacterial FAD synthetases.This domain has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases .
Probab=98.54 E-value=3.3e-06 Score=56.13 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=53.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHC---CCCEEEEE--ECCC---CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH--
Q ss_conf 789713389999999999862---99889999--7589---9875556688999999998631047532134255310--
Q gi|254780649|r 27 GNFNPPHHGHIEIAQIAIKKL---NLDQLWWI--ITPF---NSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL-- 96 (216)
Q Consensus 27 GSFdPiH~gHl~ia~~~~~~l---~ld~v~~i--ps~~---~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~-- 96 (216)
T Consensus 5 G~FDGvHlGHq~Li~~~~~~a~~~~~~~~v~tF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~g-id~~~~i~F~~~~~~ 83 (179)
T cd02064 5 GNFDGVHLGHQALIKRAKEIARERGLPSAVLTFEPHPREVLRPEKAPKLLTTLEEKLELLAALG-VDYLLVLPFDKEFAS 83 (179)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCHHHHC
T ss_conf 6265415899999999999999829976999962880897188878702589999999998669-999998447888863
Q ss_pred -HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
Q ss_conf -00328999999720136784389616881357
Q gi|254780649|r 97 -NHTETFHTILQVKKHNKSVNFVWIMGADNIKS 128 (216)
Q Consensus 97 -~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~ 128 (216)
T Consensus 84 ls~~~Fi~~---~l~~l-~~~-~iVvG~Df~FG 111 (179)
T cd02064 84 LSAEEFVKD---LLVKL-NAK-HVVVGFDFRFG 111 (179)
T ss_pred CCHHHHHHH---HHHCC-CCE-EEEECCCCCCC
T ss_conf 999999998---74147-963-99977730257