HHsearch alignment for GI: 254780649 and conserved domain: cd02064

>cd02064 Flavokinase_C Riboflavin kinase (Flavokinase). This family represents the C-terminal region of the bifunctional riboflavin biosynthesis protein riboflavin kinase / FAD synthetase. These enzymes have both ATP:riboflavin. 5'-phospho transferase and ATP:FMN-adenylyltransferase activities . The C-terminal domain has FMN-adenylyltransferase activitie. They catalyse the 5'-phosphorylation of riboflavin to FMN and the adenylylation of FMN to FAD . A domain has been identified in the N-terminal region that is well conserved in all the bacterial FAD synthetases.This domain has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases .
Probab=98.54  E-value=3.3e-06  Score=56.13  Aligned_cols=96  Identities=20%  Similarity=0.205  Sum_probs=53.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHC---CCCEEEEE--ECCC---CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH--
Q ss_conf             789713389999999999862---99889999--7589---9875556688999999998631047532134255310--
Q gi|254780649|r   27 GNFNPPHHGHIEIAQIAIKKL---NLDQLWWI--ITPF---NSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYL--   96 (216)
Q Consensus        27 GSFdPiH~gHl~ia~~~~~~l---~ld~v~~i--ps~~---~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~--   96 (216)
T Consensus         5 G~FDGvHlGHq~Li~~~~~~a~~~~~~~~v~tF~p~P~~~~~~~~~~~~l~~~~~k~~~l~~~g-id~~~~i~F~~~~~~   83 (179)
T cd02064           5 GNFDGVHLGHQALIKRAKEIARERGLPSAVLTFEPHPREVLRPEKAPKLLTTLEEKLELLAALG-VDYLLVLPFDKEFAS   83 (179)
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHCC-CCEEEEECCCHHHHC
T ss_conf             6265415899999999999999829976999962880897188878702589999999998669-999998447888863


Q ss_pred             -HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
Q ss_conf             -00328999999720136784389616881357
Q gi|254780649|r   97 -NHTETFHTILQVKKHNKSVNFVWIMGADNIKS  128 (216)
Q Consensus        97 -~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~  128 (216)
T Consensus        84 ls~~~Fi~~---~l~~l-~~~-~iVvG~Df~FG  111 (179)
T cd02064          84 LSAEEFVKD---LLVKL-NAK-HVVVGFDFRFG  111 (179)
T ss_pred             CCHHHHHHH---HHHCC-CCE-EEEECCCCCCC
T ss_conf             999999998---74147-963-99977730257