HHsearch results for GI: 254780649 and protein with PDBid: 1jhd_A
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=97.81 E-value=0.00016 Score=45.12 Aligned_cols=163 Identities=15% Similarity=0.181 Sum_probs=86.5
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC----CCCCCCCCHHHHHH
Q ss_conf 89982778971338999999999986299889999758998755566889999999986310----47532134255310
Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI----KNPRIRITAFEAYL 96 (216)
Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~----~~~~i~v~~~E~~~ 96 (216)
+|.=|= |=||+|.||..+.+.+++.++-|-+++.|... +.|. +-.+..-|+.-.+.++ ...++.++.+....
T Consensus 194 ~VvaFq-TRNp~Hr~He~l~~~al~~~~~~~lli~p~~G-~~k~--~d~~~~~r~~~~~~~~~~~~~~~~~~l~~l~~~m 269 (396)
T 1jhd_A 194 KVVAFQ-TRNPMHRAHEELCRMAMESLDADGVVVHMLLG-KLKK--GDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFDM 269 (396)
T ss_dssp SEEEEE-ESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC-CCCT--TCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECCC
T ss_pred EEEEEE-ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEC-CCCC--CCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf 677764-26889758999999999971578379854433-5878--7789899999999998623898755998435653
Q ss_pred ---HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH---HHHHHHHHHC------CEEEEECCC--CCHHHHCCHHH
Q ss_conf ---003289999997201367843896168813577777---6199999758------989993899--87143215899
Q gi|254780649|r 97 ---NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQW---HHWKRIVTTV------PIAIIDRFD--VTFNYISSPMA 162 (216)
Q Consensus 97 ---~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W---~~~~~ll~~~------~iiV~~R~g--~~~~~~~~~~~ 162 (216)
|+.-.+ +.++-.++=+++ .||+|-|- .+.... +..++|++.. .|-++.=++ |..+ .
T Consensus 270 ~yAGPrEa~--~hAiir~N~Gct-hfivGRDH-AG~g~~Y~~~~aq~i~~~~~~e~~l~I~i~~~~~~~Yc~~-c----- 339 (396)
T 1jhd_A 270 LYAGPREAV--LHAYFRQNMGAT-HFIIGRDH-AGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKK-L----- 339 (396)
T ss_dssp CCCTHHHHH--HHHHHHHHTTCS-EEEECTTT-TCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETT-T-----
T ss_pred CCCCCHHHH--HHHHHHHHCCCC-EEEECCCC-CCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEECC-C-----
T ss_conf 457854888--999999866984-16535777-7633358916678998712676787438997365299877-8-----
Q ss_pred HHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC
Q ss_conf 9986325881233454205898099980746886889999999879685
Q gi|254780649|r 163 KTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT 211 (216)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i 211 (216)
....... -+.... ......||.|++|++|++|+.+
T Consensus 340 ---~~~~~~~-----~~p~~~------~~~~~~iSGt~~r~~l~~g~~p 374 (396)
T 1jhd_A 340 ---NKIVMMR-----DVPDHT------KEDFVLLSGTKVREMLGQGIAP 374 (396)
T ss_dssp ---TEEEEGG-----GCTTCC------GGGEECCCHHHHHHHHHTTCCC
T ss_pred ---CEEEECC-----CCCCCC------CCCCEEECHHHHHHHHHCCCCC
T ss_conf ---8699736-----568887------3241774589999999883888