HHsearch results for GI: 254780649 and protein with PDBid: 1k4m_A

>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=100.00  E-value=2.7e-37  Score=234.24  Aligned_cols=191  Identities=17%  Similarity=0.236  Sum_probs=152.2

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHH-H
Q ss_conf             998277897133899999999998629988999975899875556688999999998631-04753213425531000-3
Q gi|254780649|r   22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPRIRITAFEAYLNH-T   99 (216)
Q Consensus        22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~i~v~~~E~~~~~-s   99 (216)
                      +|||||||||||+||+.|++.|++.+++|+|+++|++.++.|... .....+|..|+..+ .....+.++..|..... .
T Consensus         5 ~ai~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (213)
T 1k4m_A            5 QALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQP-EANSVQRKHMLELAIADKPLFTLDERELKRNAPS   83 (213)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCC-SSCHHHHHHHHHHHHTTCTTEEECCHHHHCSSCC
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCC
T ss_conf             799705608264999999999999809999999994888533455-6209999999866664234420110001146775


Q ss_pred             HHHH-HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             2899-999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r  100 ETFH-TILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus       100 yT~d-tL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                      ++.. +....+..+|+..++|++|+|++..+.+|+.|++++..++|+|+.|+|+...................  ....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~  161 (213)
T 1k4m_A           84 YTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTH--NPEDL  161 (213)
T ss_dssp             CHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCS--CTTHH
T ss_pred             CEEEHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf             1000166666312777448841573001001015539998378739999379963666789999999863000--02343


Q ss_pred             HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             2058980999807468868899999998796851116
Q gi|254780649|r  179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG  215 (216)
Q Consensus       179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~  215 (216)
                      .....+.+++.+.+..+||||+||+++++|+++++|.
T Consensus       162 ~~~~~~~~~~~~~~~~~ISST~IR~~l~~~~~i~~lv  198 (213)
T 1k4m_A          162 HLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLL  198 (213)
T ss_dssp             HHSSSCCEEEECCCCCCCCHHHHHHHHHTTCCCTTTS
T ss_pred             HCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHC
T ss_conf             1277864999269878709999999998499921508