HHsearch results for GI: 254780649 and protein with PDBid: 1k4m_A
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=100.00 E-value=2.7e-37 Score=234.24 Aligned_cols=191 Identities=17% Similarity=0.236 Sum_probs=152.2
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHH-H
Q ss_conf 998277897133899999999998629988999975899875556688999999998631-04753213425531000-3
Q gi|254780649|r 22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPRIRITAFEAYLNH-T 99 (216)
Q Consensus 22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~i~v~~~E~~~~~-s 99 (216)
+|||||||||||+||+.|++.|++.+++|+|+++|++.++.|... .....+|..|+..+ .....+.++..|..... .
T Consensus 5 ~ai~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (213)
T 1k4m_A 5 QALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQP-EANSVQRKHMLELAIADKPLFTLDERELKRNAPS 83 (213)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCC-SSCHHHHHHHHHHHHTTCTTEEECCHHHHCSSCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCC
T ss_conf 799705608264999999999999809999999994888533455-6209999999866664234420110001146775
Q ss_pred HHHH-HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf 2899-999972013678438961688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r 100 ETFH-TILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL 178 (216)
Q Consensus 100 yT~d-tL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (216)
++.. +....+..+|+..++|++|+|++..+.+|+.|++++..++|+|+.|+|+................... ....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 161 (213)
T 1k4m_A 84 YTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTH--NPEDL 161 (213)
T ss_dssp CHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCS--CTTHH
T ss_pred CEEEHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH--HHHHH
T ss_conf 1000166666312777448841573001001015539998378739999379963666789999999863000--02343
Q ss_pred HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 2058980999807468868899999998796851116
Q gi|254780649|r 179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG 215 (216)
Q Consensus 179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~ 215 (216)
.....+.+++.+.+..+||||+||+++++|+++++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~ISST~IR~~l~~~~~i~~lv 198 (213)
T 1k4m_A 162 HLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLL 198 (213)
T ss_dssp HHSSSCCEEEECCCCCCCCHHHHHHHHHTTCCCTTTS
T ss_pred HCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHC
T ss_conf 1277864999269878709999999998499921508