HHsearch results for GI: 254780649 and protein with PDBid: 3h05_A
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structural genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.9e-41 Score=258.11 Aligned_cols=147 Identities=21% Similarity=0.311 Sum_probs=129.9
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCHHHHHH
Q ss_conf 7899827789713389999999999862998899997589987555668899999999863104---7532134255310
Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK---NPRIRITAFEAYL 96 (216)
Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~---~~~i~v~~~E~~~ 96 (216)
.|||||||||||||+||+.+++.+. .+|+|+++|++.||.|+ ..+++++|++||+++++ .+++.++++|...
T Consensus 2 kkI~ifgGsFdP~h~GHl~i~~~~~---~~d~viv~p~~~~~~k~--~~~~~~~R~~m~~~a~~~~~~~~v~v~~~e~~~ 76 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIESLS---HFDLVLLEPSIAHAWGK--NMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQAL 76 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHTTCT---TSSEEEEEECC---------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHH---HCCEEEEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHC
T ss_conf 5799966545541299999999997---26969998202576567--878999999999999987312682675444322
Q ss_pred H-HH---HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCH
Q ss_conf 0-03---2899999972013678438961688135777776199999758989993899871432158999986325881
Q gi|254780649|r 97 N-HT---ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDE 172 (216)
Q Consensus 97 ~-~s---yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~ 172 (216)
. ++ +|+++|+++++.||+.+|+|+||+|++.+|++|++|++|++.+.++|++|.
T Consensus 77 ~~~~~s~~t~~~l~~l~~~~~~~~~~~iiG~D~~~~~~~W~~~~~i~~~~~~~~~pr~---------------------- 134 (177)
T 3h05_A 77 YQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEK---------------------- 134 (177)
T ss_dssp C----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCS----------------------
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCHHHHHHHCCEEEECCC----------------------
T ss_conf 6553312378999988741885031776324067674764278999850867984587----------------------
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 233454205898099980746886889999999879685111
Q gi|254780649|r 173 SLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216)
Q Consensus 173 ~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216)
.+||||+||++++.|+++++|
T Consensus 135 ---------------------~~ISST~IR~~l~~g~~i~~~ 155 (177)
T 3h05_A 135 ---------------------VKIRSTDIRNALIEGKDISTY 155 (177)
T ss_dssp ---------------------SCCCHHHHHHHHHHTCCCTTT
T ss_pred ---------------------CCCCHHHHHHHHHCCCCHHHH
T ss_conf ---------------------784999999999859994697