HHSEARCH alignment of GI: 254780649 and SCOP domain: d1qjca_

Alignment
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=99.91  E-value=2.3e-24  Score=158.21  Aligned_cols=141  Identities=19%  Similarity=0.280  Sum_probs=92.4

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHHH
Q ss_conf             89982778971338999999999986299889999758998755566889999999986310-47532134255310003
Q gi|254780649|r   21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLNHT   99 (216)
Q Consensus        21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~~s   99 (216)
                      |+|||||||||||+||+.+++.|.+.+  |+|+++|++.+++|+.   .+..+|..|+..+. ...++.+...+....  
T Consensus         1 k~AifgGsFdP~H~GHl~li~~a~~~~--D~v~v~~~~~~~~k~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   73 (157)
T d1qjca_           1 KRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASPSKKPM---FTLEERVALAQQATAHLGNVEVVGFSDLMA--   73 (157)
T ss_dssp             CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCCSSCCS---SCHHHHHHHHHHHTTTCTTEEEEEECSCHH--
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHC--CEEEECCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC--
T ss_conf             979980246878899999999999857--9720025676545665---678889999999888764244321021121--


Q ss_pred             HHHHHHHHHHCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             289999997201367843896-1688135777776199999758989993899871432158999986325881233454
Q gi|254780649|r  100 ETFHTILQVKKHNKSVNFVWI-MGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL  178 (216)
Q Consensus       100 yT~dtL~~lk~~~p~~~l~fi-iG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (216)
                            ....+.......... .+.+.+.....|+.++.+...+..+++.+                             
T Consensus        74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~-----------------------------  118 (157)
T d1qjca_          74 ------NFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP-----------------------------  118 (157)
T ss_dssp             ------HHHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECC-----------------------------
T ss_pred             ------CHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEC-----------------------------
T ss_conf             ------113440642234320265300225578899997278855998516-----------------------------


Q ss_pred             HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf             205898099980746886889999999879685111
Q gi|254780649|r  179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL  214 (216)
Q Consensus       179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L  214 (216)
                                 .....+||||+||+++++|+|+++|
T Consensus       119 -----------~~~~~~ISST~IR~~i~~g~di~~l  143 (157)
T d1qjca_         119 -----------SKEWSFISSSLVKEVARHQGDVTHF  143 (157)
T ss_dssp             -----------CGGGTTCCHHHHHHHHHTTCCCGGG
T ss_pred             -----------CCCCCCCCHHHHHHHHHCCCCHHHH
T ss_conf             -----------7777763789999999949996784


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Adenylyltransferase
domain: Phosphopantetheine adenylyltransferase
species: Escherichia coli [TaxId: 562]