Query gi|254780649|ref|YP_003065062.1| nicotinic acid mononucleotide adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 216 No_of_seqs 115 out of 1961 Neff 7.7 Searched_HMMs 13730 Date Wed Jun 1 10:12:06 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780649.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1kr2a_ c.26.1.3 (A:) Nicotina 100.0 0 0 299.6 11.7 181 19-215 3-236 (271) 2 d1nuua_ c.26.1.3 (A:) Cytosoli 100.0 1.4E-45 0 281.0 12.6 181 21-215 5-217 (233) 3 d1k4ma_ c.26.1.3 (A:) Nicotina 100.0 2.6E-42 0 261.8 16.8 193 20-215 3-198 (213) 4 d1jhda2 c.26.1.5 (A:174-396) A 100.0 1.8E-39 1.3E-43 245.4 1.3 181 22-215 23-206 (223) 5 d1kama_ c.26.1.3 (A:) Nicotina 100.0 4E-34 2.9E-38 214.6 15.2 169 20-214 2-172 (189) 6 d1ej2a_ c.26.1.3 (A:) Nicotina 99.9 1.5E-24 1.1E-28 159.3 13.1 144 20-214 1-145 (167) 7 d1tfua_ c.26.1.3 (A:) Phosphop 99.9 1.7E-24 1.2E-28 159.0 10.4 144 20-215 1-144 (157) 8 d1qjca_ c.26.1.3 (A:) Phosphop 99.9 2.3E-24 1.7E-28 158.2 11.0 141 21-214 1-143 (157) 9 d1o6ba_ c.26.1.3 (A:) Phosphop 99.9 1.8E-23 1.3E-27 153.1 13.8 142 21-214 2-144 (163) 10 d1od6a_ c.26.1.3 (A:) Phosphop 99.9 7.8E-24 5.7E-28 155.2 11.7 143 20-214 1-145 (160) 11 d1vlha_ c.26.1.3 (A:) Phosphop 99.9 4.3E-25 3.1E-29 162.5 2.3 56 20-81 1-56 (157) 12 d1f9aa_ c.26.1.3 (A:) Nicotina 99.9 4.1E-23 3E-27 151.0 12.2 141 20-214 1-142 (164) 13 d1lw7a1 c.26.1.3 (A:57-219) Tr 99.7 5.9E-18 4.3E-22 121.3 6.8 63 20-84 2-71 (163) 14 d1coza_ c.26.1.2 (A:) CTP:glyc 99.3 1.1E-12 8E-17 90.9 6.5 93 20-125 1-95 (126) 15 d1mrza2 c.26.1.3 (A:2-158) FMN 98.5 1E-06 7.5E-11 56.4 10.9 96 22-128 2-104 (157) 16 d1g8fa2 c.26.1.5 (A:169-389) A 98.2 1.9E-05 1.4E-09 49.1 11.5 158 27-211 27-203 (221) 17 d1x6va2 c.26.1.5 (A:390-624) A 98.0 8E-05 5.8E-09 45.5 11.9 158 21-211 25-212 (235) 18 d1v47a2 c.26.1.5 (A:136-349) A 97.9 4.9E-05 3.6E-09 46.8 9.2 157 28-211 28-197 (214) 19 d1kjqa2 c.30.1.1 (A:2-112) Gly 82.6 0.84 6.1E-05 22.3 4.4 90 10-110 2-95 (111) 20 d1ihoa_ c.26.1.4 (A:) Pantothe 63.0 4.1 0.0003 18.4 3.9 59 19-81 21-85 (282) 21 d1luca_ c.1.16.1 (A:) Bacteria 53.2 6.6 0.00048 17.2 3.8 35 20-54 1-41 (355) 22 d1t35a_ c.129.1.1 (A:) Hypothe 51.7 6.2 0.00045 17.3 3.2 30 21-50 3-32 (179) 23 d1v8fa_ c.26.1.4 (A:) Pantothe 43.2 9.6 0.0007 16.2 6.3 58 20-81 17-80 (276) 24 d1jila_ c.26.1.1 (A:) Tyrosyl- 42.6 5.3 0.00039 17.7 1.7 33 21-55 31-69 (323) 25 d2bisa1 c.87.1.8 (A:1-437) Gly 39.9 11 0.00079 15.9 4.9 16 20-35 1-16 (437) 26 d1xpua3 c.37.1.11 (A:129-417) 39.5 5.7 0.00042 17.5 1.5 36 8-47 32-67 (289) 27 d2jdid3 c.37.1.11 (D:82-357) C 36.2 5.2 0.00038 17.8 0.9 45 12-60 61-108 (276) 28 d3tata_ c.67.1.1 (A:) Aromatic 35.7 13 0.00092 15.5 2.9 40 49-91 173-212 (397) 29 d1weha_ c.129.1.1 (A:) Hypothe 34.6 13 0.00096 15.4 3.5 29 20-48 1-30 (171) 30 d1e4ea1 c.30.1.2 (A:2-131) D-a 34.6 13 0.00096 15.4 4.3 44 19-62 2-48 (130) 31 d1h3fa1 c.26.1.1 (A:5-347) Tyr 33.5 14 0.001 15.3 3.7 40 20-60 32-76 (343) 32 d1fyea_ c.23.16.4 (A:) Asparty 32.7 14 0.001 15.3 8.8 96 20-135 1-100 (229) 33 d2ts1a_ c.26.1.1 (A:) Tyrosyl- 32.4 6.2 0.00046 17.3 0.8 34 20-55 29-68 (319) 34 d2r5fa1 c.124.1.8 (A:59-316) T 30.2 16 0.0011 15.0 3.1 25 36-60 4-28 (258) 35 d1mb4a1 c.2.1.3 (A:1-132,A:355 29.6 11 0.00079 15.9 1.6 38 20-61 1-40 (147) 36 d2nx2a1 c.129.1.2 (A:1-177) Hy 28.7 17 0.0012 14.8 4.9 52 99-152 56-113 (177) 37 d1b74a1 c.78.2.1 (A:1-105) Glu 28.5 17 0.0012 14.8 6.1 83 20-113 1-86 (105) 38 d3efba1 c.124.1.8 (A:11-265) S 27.1 18 0.0013 14.7 3.9 81 36-125 2-87 (255) 39 d2ay1a_ c.67.1.1 (A:) Aromatic 26.5 18 0.0013 14.6 4.4 41 48-91 168-208 (394) 40 d2cvoa1 c.2.1.3 (A:68-218,A:38 26.4 15 0.0011 15.1 1.9 43 16-63 2-44 (183) 41 d2jdia3 c.37.1.11 (A:95-379) C 25.2 9.8 0.00072 16.2 0.7 22 12-33 61-82 (285) 42 d1c7na_ c.67.1.3 (A:) Cystalys 25.1 19 0.0014 14.5 3.8 38 50-90 165-202 (394) 43 d1ydhb_ c.129.1.1 (B:) Hypothe 24.8 20 0.0014 14.4 3.6 29 20-48 3-31 (181) 44 d2okga1 c.124.1.8 (A:89-338) C 24.1 20 0.0015 14.4 3.5 92 37-142 7-109 (250) 45 d2a84a1 c.26.1.4 (A:3-288) Pan 23.5 21 0.0015 14.3 3.8 42 18-62 28-69 (286) 46 d2q4oa1 c.129.1.1 (A:8-190) Hy 23.4 21 0.0015 14.3 4.4 29 20-48 7-35 (183) 47 d7aata_ c.67.1.1 (A:) Aspartat 22.0 22 0.0016 14.1 4.4 40 49-91 175-214 (401) 48 d2iw1a1 c.87.1.8 (A:2-371) Lip 22.0 22 0.0016 14.1 7.8 53 97-149 209-277 (370) 49 d1jaya_ c.2.1.6 (A:) Coenzyme 21.5 18 0.0013 14.6 1.5 29 20-54 1-29 (212) 50 d1weka_ c.129.1.1 (A:) Hypothe 21.5 21 0.0015 14.3 1.8 40 7-47 22-61 (208) 51 d1fx0a3 c.37.1.11 (A:97-372) C 20.8 12 0.00089 15.6 0.5 32 12-47 60-91 (276) No 1 >d1kr2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=0 Score=299.62 Aligned_cols=181 Identities=18% Similarity=0.155 Sum_probs=146.2 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCH Q ss_conf 87899827789713389999999999862------998899997589987555668899999999863104-75321342 Q gi|254780649|r 19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKL------NLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITA 91 (216) Q Consensus 19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l------~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~ 91 (216) .-.|++|||||||||+||+.+|+.|++.+ .+|+++|+|++.+|+| +..++++||++||++|++ .+++.|++ T Consensus 3 ~~~v~l~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~~~~~~~~P~~~~~~k--~~~~s~~~Rl~Ml~la~~~~~~~~vs~ 80 (271) T d1kr2a_ 3 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK--KGLIPAYHRVIMAELATKNSKWVEVDT 80 (271) T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC--TTCCCHHHHHHHHHHHTTTCSSEEECC T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHCCCCEEEEE T ss_conf 638999704467423999999999999974425615467999648998767--788999999999999985699889952 Q ss_pred HHHHHH-HHHHHHHHHHHHCCC----------------------------------------CCCCEEEECCCCCHHHHH Q ss_conf 553100-032899999972013----------------------------------------678438961688135777 Q gi|254780649|r 92 FEAYLN-HTETFHTILQVKKHN----------------------------------------KSVNFVWIMGADNIKSFH 130 (216) Q Consensus 92 ~E~~~~-~syT~dtL~~lk~~~----------------------------------------p~~~l~fiiG~D~l~~l~ 130 (216) +|.+++ ++||+|||++++++| |+.+++||||+|++.+|. T Consensus 81 ~E~~~~~~syTidTl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~~~ 160 (271) T d1kr2a_ 81 WESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFA 160 (271) T ss_dssp HHHHCSSCCCHHHHHHHHHHHHHC--------------------------------------CCCEEEEEEEHHHHHGGG T ss_pred HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECHHHHHHHH T ss_conf 14306898618999999999832233211125543222222122322221000001123468875089986145887643 Q ss_pred HHHHH-----HHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH Q ss_conf 77619-----9999758989993899871432158999986325881233454205898099980746886889999999 Q gi|254780649|r 131 QWHHW-----KRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKI 205 (216) Q Consensus 131 ~W~~~-----~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l 205 (216) +|+.| ++|++.++|+|++|+|+....... ....+.....+.+++.+.+.++||||+||++| T Consensus 161 ~~~~wk~~~~~~il~~~~liV~~R~g~~~~~~~~--------------~~~~l~~~~~~i~~~~~~~~~~ISST~IR~~i 226 (271) T d1kr2a_ 161 VPNLWKSEDITQIVANYGLICVTRAGNDAQKFIY--------------ESDVLWKHRSNIHVVNEWIANDISSTKIRRAL 226 (271) T ss_dssp STTTSCHHHHHHHHHHTCEEEEESCHHHHHHHHH--------------TCHHHHHTGGGEEEEECCSEECCCHHHHHHHH T ss_pred CCCCCCHHHHHHHHHHCCEEEEECCCCCHHHHHH--------------HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHH T ss_conf 1276534409999965889999589998677431--------------27898756598599768886673899999999 Q ss_pred HCCCCCCCCC Q ss_conf 8796851116 Q gi|254780649|r 206 IEQDNTRTLG 215 (216) Q Consensus 206 ~~~~~i~~L~ 215 (216) ++|+++++|- T Consensus 227 ~~g~~i~~lv 236 (271) T d1kr2a_ 227 RRGQSIRYLV 236 (271) T ss_dssp HTTCCCBTTB T ss_pred HCCCCCHHHC T ss_conf 8599922638 No 2 >d1nuua_ c.26.1.3 (A:) Cytosolic NMN/NAMN adenylyltransferase {Human (Homo sapiens), FKSG76 [TaxId: 9606]} Probab=100.00 E-value=1.4e-45 Score=280.95 Aligned_cols=181 Identities=20% Similarity=0.269 Sum_probs=146.4 Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE----EECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHH Q ss_conf 8998277897133899999999998629988999----9758998755566889999999986310-4753213425531 Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW----IITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAY 95 (216) Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~----ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~ 95 (216) .|++|||||||||.||+.|++.|++.++++++++ +.++.++.|.+...+++++|++||++|+ +++++.|+++|.. T Consensus 5 ~vl~~~GSFdP~H~GHl~i~~~a~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~R~~M~~la~~~~~~~~v~~~e~~ 84 (233) T d1nuua_ 5 VVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWESE 84 (233) T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHHSSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHHH T ss_pred EEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHH T ss_conf 79998304284289999999999998671023111037983677875567668999999999999844587787369976 Q ss_pred HH-HHHHHHHHHHHHCCC---------------------CCCCEEEECCCCCHHHHHHHHHH-----HHHHHHCCEEEEE Q ss_conf 00-032899999972013---------------------67843896168813577777619-----9999758989993 Q gi|254780649|r 96 LN-HTETFHTILQVKKHN---------------------KSVNFVWIMGADNIKSFHQWHHW-----KRIVTTVPIAIID 148 (216) Q Consensus 96 ~~-~syT~dtL~~lk~~~---------------------p~~~l~fiiG~D~l~~l~~W~~~-----~~ll~~~~iiV~~ 148 (216) .+ ++||++||.++++.| |+.+++||||+|++.+|++|++| ++|++.++++|++ T Consensus 85 ~~~~s~ti~tl~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~~~~wk~~~~~~~~~il~~~~~iv~~ 164 (233) T d1nuua_ 85 QAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVCVG 164 (233) T ss_dssp SSSCCCHHHHHHHHHHHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHHHTCEEEEC T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCHHHHCCHHHHHCCHHHHHHHHHCCEEEEE T ss_conf 78986289999999998312333222321000000024777528999825406544104440302299998548699980 Q ss_pred CCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 8998714321589999863258812334542058980999807468868899999998796851116 Q gi|254780649|r 149 RFDVTFNYISSPMAKTFEYARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG 215 (216) Q Consensus 149 R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~ 215 (216) |+|+........ ...+.......+++.+....+||||+||+++++|+++++|- T Consensus 165 R~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ISST~IR~~l~~g~~i~~lv 217 (233) T d1nuua_ 165 RVSHDPKGYIAE--------------SPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLI 217 (233) T ss_dssp CTTCCHHHHHHH--------------CHHHHHTGGGEEEECCSCCCCCCHHHHHHHHHTTCCCBTTB T ss_pred CCCCCHHHHHHH--------------HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHC T ss_conf 788763433344--------------78876436977996688656687899999998599921408 No 3 >d1k4ma_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=2.6e-42 Score=261.76 Aligned_cols=193 Identities=16% Similarity=0.215 Sum_probs=159.0 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHH Q ss_conf 78998277897133899999999998629988999975899875556688999999998631-04753213425531000 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL-IKNPRIRITAFEAYLNH 98 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~-~~~~~i~v~~~E~~~~~ 98 (216) ..+|||||||||||+||+.|++.|++.+++|+|+|+|++.+|+|.... ....+|.+|+..+ ...+.+.+++.|..... T Consensus 3 ~~~AlfgGSFnP~h~GHl~~~~~a~~~~~~d~v~~~p~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (213) T d1k4ma_ 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPE-ANSVQRKHMLELAIADKPLFTLDERELKRNA 81 (213) T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCCS-SCHHHHHHHHHHHHTTCTTEEECCHHHHCSS T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCCC-CCHHHHHHHHHHHHHCCCCEEEEECCCCCCC T ss_conf 667997047584849999999999997099989999928882101232-1047889988887640453134301122478 Q ss_pred --HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHH Q ss_conf --328999999720136784389616881357777761999997589899938998714321589999863258812334 Q gi|254780649|r 99 --TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSH 176 (216) Q Consensus 99 --syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (216) .+++.++...++.+|+..++|++|+|.+..+++|++|++++..++++|++|+|+................... ... T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~w~~~~~~~~~~~~~v~~R~g~~~~~~~~~~~~~~~~~~~~--~~~ 159 (213) T d1k4ma_ 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTH--NPE 159 (213) T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCS--CTT T ss_pred CCCCEEECCHHHCCCCCCCEEEECCCEEEECCCCCHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCC--HHH T ss_conf 742211000011025887524441211210133422334431564069999389962567789999875300110--034 Q ss_pred HHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 542058980999807468868899999998796851116 Q gi|254780649|r 177 ILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG 215 (216) Q Consensus 177 ~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~ 215 (216) .+.....+.+.+.+.+..+||||+||++|++|+++++|. T Consensus 160 ~l~~~~~~~~~~~~~~~~~ISST~IR~~i~~g~~i~~lv 198 (213) T d1k4ma_ 160 DLHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLL 198 (213) T ss_dssp HHHHSSSCCEEEECCCCCCCCHHHHHHHHHTTCCCTTTS T ss_pred HHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHC T ss_conf 431377854999368867778999999998499913738 No 4 >d1jhda2 c.26.1.5 (A:174-396) ATP sulfurylase catalytic domain {Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]} Probab=100.00 E-value=1.8e-39 Score=245.36 Aligned_cols=181 Identities=10% Similarity=0.095 Sum_probs=141.0 Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHH-HHH Q ss_conf 9982778971338999999999986299889999758998755566889999999986310-47532134255310-003 Q gi|254780649|r 22 IGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYL-NHT 99 (216) Q Consensus 22 IgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~-~~s 99 (216) || | |||||||+||+.+|+.|++.+++|+|+|+|++.||+|.....++..+|++|+.+++ +.+++.|+++|... +++ T Consensus 23 ~~-f-~TfnP~H~GHl~ia~~a~~~~~ld~v~~iP~~~~p~K~~~~~~~~~~r~~m~~~a~~~~~~~~is~~E~~~~~~s 100 (223) T d1jhda2 23 VA-F-QTRNPMHRAHEELCRMAMESLDADGVVVHMLLGKLKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFDMLYAG 100 (223) T ss_dssp EE-E-EESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECCCCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECCCCCCT T ss_pred EE-E-ECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC T ss_conf 88-6-278999899999999999972758569832667777677764449999999998635788436435111025787 Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHH Q ss_conf 28999999720136784389616881357777761999997589899938998714321589999863258812334542 Q gi|254780649|r 100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILC 179 (216) Q Consensus 100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (216) ||++||.++++++++..+ |+||+|.+..+++|++|++++..++++|..|++.......... +.. ......... T Consensus 101 yt~~tl~~l~~~~~~~~~-~iiG~D~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~ 173 (223) T d1jhda2 101 PREAVLHAYFRQNMGATH-FIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTA---YSK---KLNKIVMMR 173 (223) T ss_dssp HHHHHHHHHHHHHTTCSE-EEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEE---EET---TTTEEEEGG T ss_pred CHHHHHHHHHHHCCCCEE-EEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH---HHH---HHCCCEEHH T ss_conf 199999999985885607-8886153013357670788889986131235565433421677---765---522300054 Q ss_pred HCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC-CCCC Q ss_conf 05898099980746886889999999879685-1116 Q gi|254780649|r 180 TTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT-RTLG 215 (216) Q Consensus 180 ~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i-~~L~ 215 (216) ... ...+.+.++||||+||++|++|++| .+|. T Consensus 174 ~~~----~~~~~~~i~ISST~IR~~l~~G~~ip~~l~ 206 (223) T d1jhda2 174 DVP----DHTKEDFVLLSGTKVREMLGQGIAPPPEFS 206 (223) T ss_dssp GCT----TCCGGGEECCCHHHHHHHHHTTCCCCTTTC T ss_pred HHH----CCCCCCCCEECHHHHHHHHHCCCCCCCCCC T ss_conf 301----005788614378999999987379984557 No 5 >d1kama_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=100.00 E-value=4e-34 Score=214.57 Aligned_cols=169 Identities=25% Similarity=0.462 Sum_probs=147.4 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHH-H Q ss_conf 789982778971338999999999986299889999758998755566889999999986310-47532134255310-0 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYL-N 97 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~-~ 97 (216) -|||||||||||||.||+.+++.|.+.+++++|+++|++.++.+.........+|..|+.++. +...+.+.+.|... + T Consensus 2 kkIalfgGSFdP~H~GH~~ii~~a~~~~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (189) T d1kama_ 2 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREG 81 (189) T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC---------CHHHHHHHHHHHHTTCTTEEECCGGGSTTC T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCC T ss_conf 77999663769898899999999999829998999963577632110146789888887765036762122012230678 Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHH Q ss_conf 03289999997201367843896168813577777619999975898999389987143215899998632588123345 Q gi|254780649|r 98 HTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHI 177 (216) Q Consensus 98 ~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216) ++||++++.++++.+|...++|++|+|...++..|+.++.++..++.++..|++.... T Consensus 82 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 139 (189) T d1kama_ 82 PSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVE---------------------- 139 (189) T ss_dssp CCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCC---------------------- T ss_pred CCEEHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCC---------------------- T ss_conf 6020555667763277630222110000112121000354431123111046321111---------------------- Q ss_pred HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 4205898099980746886889999999879685111 Q gi|254780649|r 178 LCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 178 ~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216) ....+.+++....+||||+||+++++|+++++| T Consensus 140 ----~~~~~~~~~~~~~~ISST~IR~~i~~~~~~~~l 172 (189) T d1kama_ 140 ----TPYPLLFADVPEFEVSSTMIRERFKSKKPTDYL 172 (189) T ss_dssp ----CSSCCEEEECCCBCCCHHHHHHHHHHTCCCTTT T ss_pred ----CCHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHH T ss_conf ----001321023655768759999999839990373 No 6 >d1ej2a_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=99.92 E-value=1.5e-24 Score=159.29 Aligned_cols=144 Identities=16% Similarity=0.253 Sum_probs=89.4 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH Q ss_conf 78998277897133899999999998629988999975899875556688999999998631047532134255310003 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLNHT 99 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~~s 99 (216) || |||||||||+|+||+.+++.|.+.+ |+++++++..++.+++....++++|++|++.++.+..+ T Consensus 1 mk-gi~~G~FdP~H~GH~~ii~~a~~~~--d~v~v~i~~~~~~~~~~~~~~~~~R~~mi~~~~~~~~~------------ 65 (167) T d1ej2a_ 1 MR-GLLVGRMQPFHRGHLQVIKSILEEV--DELIICIGSAQLSHSIRDPFTAGERVMMLTKALSENGI------------ 65 (167) T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSSSCSCHHHHHHHHHHHHHHTTC------------ T ss_pred CE-EEEEECCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC------------ T ss_conf 97-9996445999989999999999977--96399970587777755446689999999997887088------------ Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHH Q ss_conf 28999999720136784389616881357777761999997589899938998714321589999863258812334542 Q gi|254780649|r 100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILC 179 (216) Q Consensus 100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (216) ....++.++.|.+.....|..+.+.+......|+.+..+. ...+.... T Consensus 66 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---------- 113 (167) T d1ej2a_ 66 --------------PASRYYIIPVQDIECNALWVGHIKMLTPPFDRVYSGNPLV--------QRLFSEDG---------- 113 (167) T ss_dssp --------------CGGGEEEEECCCCSCHHHHHHHHHHHSCCCSEEECCCHHH--------HHHHHHTT---------- T ss_pred --------------CCEEEEECCCHHHHHHHHHHHHHHEEEECEEEEECCHHHH--------HHHHHCCC---------- T ss_conf --------------7035775142033357879988762031204898536999--------88777179---------- Q ss_pred HCCCCEEEEEE-CCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 05898099980-746886889999999879685111 Q gi|254780649|r 180 TTSPPSWLFIH-DRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 180 ~~~~~~~~~i~-~~~~~ISST~IR~~l~~~~~i~~L 214 (216) . ....+. ....+||||+||+++++|+++++| T Consensus 114 ---~-~v~~~~~~~~~~ISST~IR~~i~~g~~~~~l 145 (167) T d1ej2a_ 114 ---Y-EVTAPPLFYRDRYSGTEVRRRMLDDGDWRSL 145 (167) T ss_dssp ---C-CEECCCCSSTTTSSHHHHHHHHHHTCCCGGG T ss_pred ---C-EEEECCCCCCCCCCHHHHHHHHHCCCCHHHH T ss_conf ---7-6996462124655689999999859985696 No 7 >d1tfua_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Probab=99.91 E-value=1.7e-24 Score=159.04 Aligned_cols=144 Identities=14% Similarity=0.097 Sum_probs=87.4 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH Q ss_conf 78998277897133899999999998629988999975899875556688999999998631047532134255310003 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLNHT 99 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~~s 99 (216) ||+|||||||||+|+||+.+|+.+++.++.+.|+..+++.++++ . .....+..+...+...........+ . T Consensus 1 m~~Av~~GsFdPiH~GHl~i~~~a~~~~d~~~v~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 71 (157) T d1tfua_ 1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGM--F--DLDERIAMVKESTTHLPNLRVQVGH-----G 71 (157) T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCSSSCCS--S--CHHHHHHHHHHHCTTCTTEEEEEEC-----S T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC--C--CHHHHHHHHHHHHHCCCCCCCCCCC-----C T ss_conf 98768484789887899999999998458677412556766664--3--3777766788875301222333333-----3 Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHH Q ss_conf 28999999720136784389616881357777761999997589899938998714321589999863258812334542 Q gi|254780649|r 100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILC 179 (216) Q Consensus 100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (216) .+.... ...........+..|.|...+.+.|...+++.+...+.+..|++ T Consensus 72 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------------------------- 121 (157) T d1tfua_ 72 LVVDFV--RSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPR---------------------------- 121 (157) T ss_dssp CHHHHH--HHTTCCEEEEEECTTCCHHHHHHHHHHHHHHHCCEEEEEECCGG---------------------------- T ss_pred CCCCCC--CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCC---------------------------- T ss_conf 332111--24687547666530332102456799999726634387206667---------------------------- Q ss_pred HCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 058980999807468868899999998796851116 Q gi|254780649|r 180 TTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTLG 215 (216) Q Consensus 180 ~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L~ 215 (216) ..+||||+||+++++|+++++|- T Consensus 122 -------------~~~ISST~IR~~i~~~~~i~~lv 144 (157) T d1tfua_ 122 -------------YSFVSSSLAKEVAMLGGDVSELL 144 (157) T ss_dssp -------------GTTCCHHHHHHHHHTTCCCGGGS T ss_pred -------------CCCCCHHHHHHHHHCCCCHHHHC T ss_conf -------------75225799999998499967846 No 8 >d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]} Probab=99.91 E-value=2.3e-24 Score=158.21 Aligned_cols=141 Identities=19% Similarity=0.280 Sum_probs=92.4 Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHHH Q ss_conf 89982778971338999999999986299889999758998755566889999999986310-47532134255310003 Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLNHT 99 (216) Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~~s 99 (216) |+|||||||||||+||+.+++.|.+.+ |+|+++|++.+++|+. .+..+|..|+..+. ...++.+...+.... T Consensus 1 k~AifgGsFdP~H~GHl~li~~a~~~~--D~v~v~~~~~~~~k~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 73 (157) T d1qjca_ 1 KRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASPSKKPM---FTLEERVALAQQATAHLGNVEVVGFSDLMA-- 73 (157) T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCCSSCCS---SCHHHHHHHHHHHTTTCTTEEEEEECSCHH-- T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHC--CEEEECCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-- T ss_conf 979980246878899999999999857--9720025676545665---678889999999888764244321021121-- Q ss_pred HHHHHHHHHHCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH Q ss_conf 289999997201367843896-1688135777776199999758989993899871432158999986325881233454 Q gi|254780649|r 100 ETFHTILQVKKHNKSVNFVWI-MGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL 178 (216) Q Consensus 100 yT~dtL~~lk~~~p~~~l~fi-iG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (216) ....+.......... .+.+.+.....|+.++.+...+..+++.+ T Consensus 74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~----------------------------- 118 (157) T d1qjca_ 74 ------NFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMP----------------------------- 118 (157) T ss_dssp ------HHHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECC----------------------------- T ss_pred ------CHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEC----------------------------- T ss_conf ------113440642234320265300225578899997278855998516----------------------------- Q ss_pred HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 205898099980746886889999999879685111 Q gi|254780649|r 179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216) .....+||||+||+++++|+|+++| T Consensus 119 -----------~~~~~~ISST~IR~~i~~g~di~~l 143 (157) T d1qjca_ 119 -----------SKEWSFISSSLVKEVARHQGDVTHF 143 (157) T ss_dssp -----------CGGGTTCCHHHHHHHHHTTCCCGGG T ss_pred -----------CCCCCCCCHHHHHHHHHCCCCHHHH T ss_conf -----------7777763789999999949996784 No 9 >d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=99.90 E-value=1.8e-23 Score=153.08 Aligned_cols=142 Identities=16% Similarity=0.233 Sum_probs=88.0 Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCCHHHHHHHHH Q ss_conf 899827789713389999999999862998899997589987555668899999999863104-7532134255310003 Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK-NPRIRITAFEAYLNHT 99 (216) Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~-~~~i~v~~~E~~~~~s 99 (216) +||||||||||||+||+.+++.+.+.+ |+|+++|+..++.+ ...++++|.+|+..+.. .+......++.. T Consensus 2 ~IaifgGsFdPiH~GHl~i~~~a~~~~--D~v~v~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---- 72 (163) T d1o6ba_ 2 SIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNSSKK---PLFSVEERCELLREVTKDIPNITVETSQGL---- 72 (163) T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCCSSC---CSSCHHHHHHHHHHHHTTCTTEEEEECSSC---- T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHC--CEEEECCCCCCCCC---CCCCHHHHHHHHHHHCCCCCCCEECCCCCC---- T ss_conf 099966066988889999999999868--97787035322222---358999999987641035675300134454---- Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHHH Q ss_conf 28999999720136784389616881357777761999997589899938998714321589999863258812334542 Q gi|254780649|r 100 ETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHILC 179 (216) Q Consensus 100 yT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (216) +....+.........++.+.+......++..+..-+. +. T Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---------------------------- 111 (163) T d1o6ba_ 73 ----LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLD---------ES---------------------------- 111 (163) T ss_dssp ----HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHC---------TT---------------------------- T ss_pred ----CCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC---------CC---------------------------- T ss_conf ----3322200275034542037412466778999999858---------56---------------------------- Q ss_pred HCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 05898099980746886889999999879685111 Q gi|254780649|r 180 TTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 180 ~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216) ....+.+.+....+||||+||+++++|+|+++| T Consensus 112 --~~~~~~~~~~~~~~ISST~IR~~i~~g~~i~~l 144 (163) T d1o6ba_ 112 --IETFFMMANNQYSFLSSSIVKEVARYDGSVSEF 144 (163) T ss_dssp --SEEEEEECCSTTTTCCHHHHHHHHHTTCCCTTT T ss_pred --CCEEECCCCCHHHCCCHHHHHHHHHCCCCHHHH T ss_conf --536752342000001779999999929996785 No 10 >d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]} Probab=99.90 E-value=7.8e-24 Score=155.20 Aligned_cols=143 Identities=15% Similarity=0.235 Sum_probs=85.9 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCHHHHHHHH Q ss_conf 789982778971338999999999986299889999758998755566889999999986310-4753213425531000 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-KNPRIRITAFEAYLNH 98 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-~~~~i~v~~~E~~~~~ 98 (216) ||+ ||||||||||+||+.+++.|.+.+ |+|+++|+..++.| .....+...|..++..+. ......+...+..... T Consensus 1 Mk~-ifgGsFdP~H~GHl~ii~~a~~~~--D~v~i~~~~~~~kk-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (160) T d1od6a_ 1 MHV-VYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENPSKR-GQYLFSAEERLAIIREATAHLANVEAATFSGLLVD 76 (160) T ss_dssp CEE-EEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHH T ss_pred CEE-EEEECCCCCCHHHHHHHHHHHHHC--CEEEEECCCCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH T ss_conf 969-942326876799999999999848--88788436777766-66557799999987753200122223552113312 Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHH-HHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHH Q ss_conf 328999999720136784389616881357777-7619999975898999389987143215899998632588123345 Q gi|254780649|r 99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQ-WHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHI 177 (216) Q Consensus 99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~-W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (216) + ..............+.|.+..... |+.+..+-.....+ T Consensus 77 -----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i-------------------------------- 116 (160) T d1od6a_ 77 -----F---VRRVGAQAIVKGLRAVSDYEYELQMAHLNRQLYPGLETL-------------------------------- 116 (160) T ss_dssp -----H---HHHTTCSEEEEEECTTSCHHHHHHHHHHHHHHTTTCEEE-------------------------------- T ss_pred -----H---HHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCEE-------------------------------- T ss_conf -----4---532422420211037426666657999999862477675-------------------------------- Q ss_pred HHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 4205898099980746886889999999879685111 Q gi|254780649|r 178 LCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 178 ~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216) +.+.+....+||||+||+++++|+|+++| T Consensus 117 --------~l~~~~~~~~ISST~IR~~i~~g~~i~~l 145 (160) T d1od6a_ 117 --------FILAATRYSFVSSTMVKEIARYGGDVSKL 145 (160) T ss_dssp --------EEECCGGGTTCCHHHHHHHHHTTCCCTTT T ss_pred --------ECCCCCCCCCCCHHHHHHHHHCCCCHHHH T ss_conf --------33478554565639999999949986783 No 11 >d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]} Probab=99.89 E-value=4.3e-25 Score=162.47 Aligned_cols=56 Identities=30% Similarity=0.494 Sum_probs=44.7 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH Q ss_conf 78998277897133899999999998629988999975899875556688999999998631 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSL 81 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~ 81 (216) || |||||||||||+||+.+|+.|++.+ |+|+++|+..++++... ....+..+.+.. T Consensus 1 Mk-aifgGsFdPiH~GHl~i~~~a~~~~--D~v~v~~~~~~~~~~~~---~~~~~~~~~~~~ 56 (157) T d1vlha_ 1 MK-AVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENPRKKCMF---TLEERKKLIEEV 56 (157) T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCTTCCCSS---CHHHHHHHHHHH T ss_pred CE-EEEEECCCCCCHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCC---CHHHHHHHHHHH T ss_conf 92-8972337988689999999999853--81000335665334457---889999999987 No 12 >d1f9aa_ c.26.1.3 (A:) Nicotinamide mononucleotide (NMN) adenylyltransferase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=99.89 E-value=4.1e-23 Score=151.04 Aligned_cols=141 Identities=14% Similarity=0.169 Sum_probs=91.3 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CCCCHHHHHHHH Q ss_conf 7899827789713389999999999862998899997589987555668899999999863104753-213425531000 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPR-IRITAFEAYLNH 98 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~-i~v~~~E~~~~~ 98 (216) || |||||||||+|+||+.+++.|.+.+ |+++++++..++.+.+....++++|.+|++.++.+.. ..+...+. .. T Consensus 1 mk-gl~~G~FdP~H~GH~~li~~a~~~~--d~v~v~i~~~~~~~~~~~~~s~~~R~~~i~~~~~~~~~~~~~~~~~--~~ 75 (164) T d1f9aa_ 1 LR-GFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQKSHTLENPFTAGERILMITQSLKDYDLTYYPIPIK--DI 75 (164) T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECC--CC T ss_pred CE-EEEECCCCCCCHHHHHHHHHHHHHC--CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC--CC T ss_conf 97-9996156999889999999999968--9749995477644576777889999999999753347624521335--43 Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHCCHHHHHHHHCCCCHHHHHHH Q ss_conf 32899999972013678438961688135777776199999758989993899871432158999986325881233454 Q gi|254780649|r 99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHWKRIVTTVPIAIIDRFDVTFNYISSPMAKTFEYARLDESLSHIL 178 (216) Q Consensus 99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~~~ll~~~~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (216) .++..+..++++..++..++| +.| ....++.+..++-|..-+. T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~v~~~~~--------------------------- 118 (164) T d1f9aa_ 76 EFNSIWVSYVESLTPPFDIVY--SGN--------PLVRVLFEERGYEVKRPEM--------------------------- 118 (164) T ss_dssp SCGGGHHHHHHHHSCCCSEEE--CCC--------HHHHHHHHHTTCEEECCCC--------------------------- T ss_pred CHHHHHHHHHHHHCCCEEEEE--CCH--------HHHHHHHHHCCCEEEEECC--------------------------- T ss_conf 207779999975258669998--284--------9999998826982898147--------------------------- Q ss_pred HHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCC Q ss_conf 205898099980746886889999999879685111 Q gi|254780649|r 179 CTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNTRTL 214 (216) Q Consensus 179 ~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i~~L 214 (216) ....+||||.||+++++|+++++| T Consensus 119 ------------~~~~~ISST~IR~~i~~g~~i~~~ 142 (164) T d1f9aa_ 119 ------------FNRKEYSGTEIRRRMLNGEKWEHL 142 (164) T ss_dssp ------------CSTTTSSHHHHHHHHHHTCCCGGG T ss_pred ------------CCCCCCCHHHHHHHHHCCCCHHHH T ss_conf ------------677776789999999959985785 No 13 >d1lw7a1 c.26.1.3 (A:57-219) Transcriptional regulator NadR, NMN-adenylyltransferase domain {Haemophilus influenzae [TaxId: 727]} Probab=99.71 E-value=5.9e-18 Score=121.28 Aligned_cols=63 Identities=27% Similarity=0.434 Sum_probs=51.9 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-------CCCCCCCHHHHHHHHHHHCCC Q ss_conf 78998277897133899999999998629988999975899875-------556688999999998631047 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-------NYNLSSSLEKRISLSQSLIKN 84 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-------~~~~~~~~~~R~~m~~~~~~~ 84 (216) -|||||||||||+|.||+.+++.|.+.+ |+++++++..++.+ ......++++|++|++.+... T Consensus 2 kkigl~~G~FdP~H~GH~~l~~~a~~~~--d~v~v~i~~~~~~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~ 71 (163) T d1lw7a1 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKY 71 (163) T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTST T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC T ss_conf 7699995247989999999999999968--944999978998644456555656789999999999983766 No 14 >d1coza_ c.26.1.2 (A:) CTP:glycerol-3-phosphate cytidylyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=99.33 E-value=1.1e-12 Score=90.89 Aligned_cols=93 Identities=25% Similarity=0.241 Sum_probs=60.0 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC--CCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH Q ss_conf 789982778971338999999999986299889999758998--755566889999999986310475321342553100 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNS--VKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAYLN 97 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p--~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~~~ 97 (216) ||+.+-+|+|||+|.||+++.+.|.+.. |++++..+.... .+++....+.++|.+|++++-.-..+.+.. + T Consensus 1 Mk~V~~~G~FD~lH~GH~~~l~~Ak~~g--d~liV~v~sD~~~~~~k~~pi~~~~eR~~~l~~~~~Vd~v~~~~-----~ 73 (126) T d1coza_ 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEK-----N 73 (126) T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEEC-----C T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHC--CEEEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEECC-----C T ss_conf 9499991175889989999999998609--55255540330112014756577899998754322566146515-----5 Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCC Q ss_conf 0328999999720136784389616881 Q gi|254780649|r 98 HTETFHTILQVKKHNKSVNFVWIMGADN 125 (216) Q Consensus 98 ~syT~dtL~~lk~~~p~~~l~fiiG~D~ 125 (216) ..++.+ .+++..|+ ++++|.|. T Consensus 74 ~~~~~~---~i~~~~~d---~~v~G~D~ 95 (126) T d1coza_ 74 WEQKKQ---DIIDHNID---VFVMGDDW 95 (126) T ss_dssp STTHHH---HHHHTTCS---EEEEEGGG T ss_pred CCCCHH---HHHCCCCC---EEEECCCC T ss_conf 311076---65144898---76666535 No 15 >d1mrza2 c.26.1.3 (A:2-158) FMN adenylyltransferase domain of bifunctional FAD synthetase {Thermotoga maritima [TaxId: 2336]} Probab=98.48 E-value=1e-06 Score=56.44 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=51.2 Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCCCCC----CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH Q ss_conf 9982778971338999999999986---2998899997589987----55566889999999986310475321342553 Q gi|254780649|r 22 IGLFGGNFNPPHHGHIEIAQIAIKK---LNLDQLWWIITPFNSV----KNYNLSSSLEKRISLSQSLIKNPRIRITAFEA 94 (216) Q Consensus 22 IgifGGSFdPiH~gHl~ia~~~~~~---l~ld~v~~ips~~~p~----K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~ 94 (216) |+| |+||-+|.||..+.+.+.+. .++.-+.+...+ ||. +......+.++|.++++.... .+ +-+++. T Consensus 2 vti--G~FDGvH~GHq~li~~~~~~a~~~~~~~~v~tf~~-~p~~~~~~~~~~l~~~~~k~~~l~~~g~--~~-~l~f~~ 75 (157) T d1mrza2 2 VSI--GVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISY-PPEYFLPDFPGLLMTVESRVEMLSRYAR--TV-VLDFFR 75 (157) T ss_dssp EEE--ECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESS-CGGGGSTTCCCBSSCHHHHHHHHTTTSC--EE-EECHHH T ss_pred EEE--ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC-CCHHEEECCCCCCCCHHHHHHHHHCCCC--EE-EEHHHH T ss_conf 899--72610458999999999999997299856764278-8231474166544447776555430343--02-212566 Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHH Q ss_conf 1000328999999720136784389616881357 Q gi|254780649|r 95 YLNHTETFHTILQVKKHNKSVNFVWIMGADNIKS 128 (216) Q Consensus 95 ~~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~ 128 (216) -..-+ .-+=+..+ -.+.+ .+++|.|--.. T Consensus 76 ~~~ls-~~~Fi~~~---l~~~~-~ivvG~Df~FG 104 (157) T d1mrza2 76 IKDLT-PEGFVERY---LSGVS-AVVVGRDFRFG 104 (157) T ss_dssp HTTCC-HHHHHHHH---CTTCC-EEEEETTCCBS T ss_pred HHHHH-HHHHHHHH---HHCCC-EEEEECCCCCC T ss_conf 76540-66789988---63273-89995574004 No 16 >d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=98.17 E-value=1.9e-05 Score=49.07 Aligned_cols=158 Identities=17% Similarity=0.163 Sum_probs=84.2 Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC---CCCCCCHHHHHH---HHHH Q ss_conf 7897133899999999998629988999975899875556688999999998631047---532134255310---0032 Q gi|254780649|r 27 GNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN---PRIRITAFEAYL---NHTE 100 (216) Q Consensus 27 GSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~---~~i~v~~~E~~~---~~sy 100 (216) =|=||+|.||..+...+.+..+ +.|++.|. ..+.|. +-.+.+-|+.-.+.++++ ..+.+..+.... |+.. T Consensus 27 qTrnp~Hr~He~i~~~a~~~~~-~~lli~p~-vg~~k~--gd~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~m~yaGPrE 102 (221) T d1g8fa2 27 QTRNPMHRAHRELTVRAAREAN-AKVLIHPV-VGLTKP--GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMRMSGDRE 102 (221) T ss_dssp EESSCCCHHHHHHHHHHHHHHT-CEEEEEEB-CSBCST--TCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBCCCCHHHH T ss_pred ECCCCCCHHHHHHHHHHHHHCC-CCEEEEEC-CCCCCC--CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHH T ss_conf 6389997789999999998548-98899402-157764--5579799999999999746898589972363002455388 Q ss_pred HHHHHHHH-HCCCCCCCEEEECCCCCHH--------HHHHHHHHHHHHHH----CCEEEEECCCCCHHHHCCHHHHHHHH Q ss_conf 89999997-2013678438961688135--------77777619999975----89899938998714321589999863 Q gi|254780649|r 101 TFHTILQV-KKHNKSVNFVWIMGADNIK--------SFHQWHHWKRIVTT----VPIAIIDRFDVTFNYISSPMAKTFEY 167 (216) Q Consensus 101 T~dtL~~l-k~~~p~~~l~fiiG~D~l~--------~l~~W~~~~~ll~~----~~iiV~~R~g~~~~~~~~~~~~~~~~ 167 (216) .+ +.++ ++.+. ++ .||+|-|-.- ++-.=++.++++.. ..|-++.-.+.-.-.. .+. T Consensus 103 A~--lhAiirkN~G-ct-hfiVGRDHAG~g~~~~~~~~Y~~~~a~~~~~~~~~~l~I~ii~~~~~~Yc~~-------c~~ 171 (221) T d1g8fa2 103 AV--WHAIIRKNYG-AS-HFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYLPD-------EDR 171 (221) T ss_dssp HH--HHHHHHHHTT-CS-EEECCTTTTCCCBCTTSCBSSCTTHHHHHHHHTHHHHCSEEECCCCEEEEGG-------GTE T ss_pred HH--HHHHHHHHCC-CC-EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECC-------CCE T ss_conf 99--9999998638-88-0686464568788986422357145678887516445602312451466213-------771 Q ss_pred CCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC Q ss_conf 25881233454205898099980746886889999999879685 Q gi|254780649|r 168 ARLDESLSHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT 211 (216) Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i 211 (216) .. .....++. ......||+|+||++|++|+.| T Consensus 172 ~v--------~~~~c~h~----~~~~i~ISGT~iR~~L~~G~~i 203 (221) T d1g8fa2 172 YA--------PIDQIDTT----KTRTLNISGTELRRRLRVGGEI 203 (221) T ss_dssp EE--------EGGGCSSS----CCCCBCCCHHHHHHHHHHTCCC T ss_pred EE--------ECCCCCCC----CCCEEEECHHHHHHHHHCCCCC T ss_conf 87--------76656898----6754874689999999879998 No 17 >d1x6va2 c.26.1.5 (A:390-624) ATP sulfurylase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Probab=98.00 E-value=8e-05 Score=45.54 Aligned_cols=158 Identities=18% Similarity=0.157 Sum_probs=82.8 Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCC-----CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC-----CCCCCCCC Q ss_conf 8998277897133899999999998629-----9889999758998755566889999999986310-----47532134 Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLN-----LDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLI-----KNPRIRIT 90 (216) Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~-----ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~-----~~~~i~v~ 90 (216) +|.=|= |=||+|.||..+.+.+.+.+. .+-+++.|. ..+.| .+-.+.+-|+.-.+.++ ....+.++ T Consensus 25 ~VvaFq-TRNp~HraHe~i~~~a~~~~~~~~~~~~~lli~Pv-vG~~k--~gD~~~~~~~~~y~~l~~~~~~~~~~~~l~ 100 (235) T d1x6va2 25 AVSAFQ-LRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPL-GGWTK--DDDVPLMWRMKQHAAVLEEGVLNPETTVVA 100 (235) T ss_dssp EEEEEE-ESSCCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEB-CSCCC--TTSCCHHHHHHHHHHHHHTTSSCGGGEEEC T ss_pred EEEEEE-CCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-CCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf 677863-28998678999999999998743355772898301-15677--776481889999999998426897757997 Q ss_pred HHHHHH---HHHHHHHHHHHH-HCCCCCCCEEEECCCCCHH------------HHHHHHHHHHHHHHCCEEEEECCCCCH Q ss_conf 255310---003289999997-2013678438961688135------------777776199999758989993899871 Q gi|254780649|r 91 AFEAYL---NHTETFHTILQV-KKHNKSVNFVWIMGADNIK------------SFHQWHHWKRIVTTVPIAIIDRFDVTF 154 (216) Q Consensus 91 ~~E~~~---~~syT~dtL~~l-k~~~p~~~l~fiiG~D~l~------------~l~~W~~~~~ll~~~~iiV~~R~g~~~ 154 (216) .+.... |+.-. .+.++ ++.| +++ .||+|-|-.- .++.+.-..+..+...|-++.-++.-. T Consensus 101 ~l~~~mryAGPrEA--llhAiiRkN~-GcT-hfiVGRDHAG~g~~~~~~~~y~~~~a~~~~~~~~~~l~I~ii~~~~~~Y 176 (235) T d1x6va2 101 IFPSPMMYAGPTEV--QWHCRARMVA-GAN-FYIVGRDPAGMPHPETGKDLYEPSHGAKVLTMAPGLITLEIVPFRVAAY 176 (235) T ss_dssp CBCCCCCCCHHHHH--HHHHHHHHHT-TCS-EEEECSSTTCCBCTTTCSBSSCTTHHHHHHHHCSSCTTSEEEECCCEEE T ss_pred ECCCCCCCCCCHHH--HHHHHHHHHC-CCC-EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEE T ss_conf 33665444660899--9999999864-887-5887676667788766654568427899987363335324654121133 Q ss_pred HHHCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEE----CCCCCCCHHHHHHHHHCCCCC Q ss_conf 432158999986325881233454205898099980----746886889999999879685 Q gi|254780649|r 155 NYISSPMAKTFEYARLDESLSHILCTTSPPSWLFIH----DRHHIISSTAIRKKIIEQDNT 211 (216) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~----~~~~~ISST~IR~~l~~~~~i 211 (216) -. .-..+...+ .....||.|+||++|++|+.| T Consensus 177 c~-------------------------~~~~~~~~~~~~~~~~~~ISGT~iR~~L~~G~~i 212 (235) T d1x6va2 177 NK-------------------------KKKRMDYYDSEHHEDFEFISGTRMRKLAREGQKP 212 (235) T ss_dssp ET-------------------------TTTEEEECCSTTGGGEECCCHHHHHHHHHTTCCC T ss_pred EC-------------------------CCCCEECCCCCCCCCEEEECHHHHHHHHHCCCCC T ss_conf 04-------------------------5784632778998770652689999999874988 No 18 >d1v47a2 c.26.1.5 (A:136-349) ATP sulfurylase catalytic domain {Thermus thermophilus [TaxId: 274]} Probab=97.89 E-value=4.9e-05 Score=46.77 Aligned_cols=157 Identities=16% Similarity=0.176 Sum_probs=81.4 Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC----CCCCCCCHHHHHH---HHHH Q ss_conf 89713389999999999862998899997589987555668899999999863104----7532134255310---0032 Q gi|254780649|r 28 NFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK----NPRIRITAFEAYL---NHTE 100 (216) Q Consensus 28 SFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~----~~~i~v~~~E~~~---~~sy 100 (216) |=||+|.||-.+.+.+++.. |.+++.|. ..+.| .+-.+.+-|+.--+.+++ .+++.+..+.... |+.- T Consensus 28 Trnp~Hr~He~i~~~a~~~~--~~lli~p~-vG~~k--~gd~~~~~r~~~y~~~~~~~~~~~~v~l~~~~~~m~yaGPrE 102 (214) T d1v47a2 28 TRNAPHRAHEYLIRLGLELA--DGVLVHPI-LGAKK--PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPMRYAGPKE 102 (214) T ss_dssp ESSCCCHHHHHHHHHHHHHS--SEEEEEEB-CSCCC--TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCCCCCTHHH T ss_pred CCCCCCHHHHHHHHHHHHHC--CCEEEEEE-ECCCC--CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHH T ss_conf 38998789999999999705--87799642-23687--566588999999999985237877299985476210046158 Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH---HHHHHHHHHC---CEEEEECCCCCHHHHCCHHHHHHHHCCCCHHH Q ss_conf 89999997201367843896168813577777---6199999758---98999389987143215899998632588123 Q gi|254780649|r 101 TFHTILQVKKHNKSVNFVWIMGADNIKSFHQW---HHWKRIVTTV---PIAIIDRFDVTFNYISSPMAKTFEYARLDESL 174 (216) Q Consensus 101 T~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W---~~~~~ll~~~---~iiV~~R~g~~~~~~~~~~~~~~~~~~~~~~~ 174 (216) . .+.++-.++=+++ .||+|-|-. +.... +..+++++.. .|-++.=++.-.-. ........... T Consensus 103 A--~lhAiirkN~Gct-hfiVGRDHA-G~g~~Y~~~~a~~i~~~~~~l~I~ii~~~e~~Yc~-------~c~~~v~~~~c 171 (214) T d1v47a2 103 A--VFHALVRKNFGAT-HFLVGRDHA-GVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCP-------LCGGIASERTC 171 (214) T ss_dssp H--HHHHHHHHHTTCS-EEEECTTTT-CSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEET-------TTTEEEETTTS T ss_pred H--HHHHHHHHHCCCC-EEEECCCCC-CHHHCCCCHHHHHHHHHCCCCCCEEEECCCCEEEH-------HHCCEEECCCC T ss_conf 9--9999999865887-388747677-62213793355689875772682699716225336-------43856333557 Q ss_pred HHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCC Q ss_conf 3454205898099980746886889999999879685 Q gi|254780649|r 175 SHILCTTSPPSWLFIHDRHHIISSTAIRKKIIEQDNT 211 (216) Q Consensus 175 ~~~~~~~~~~~~~~i~~~~~~ISST~IR~~l~~~~~i 211 (216) .+. . ......||.|+||++|++|+.| T Consensus 172 ~~~---~--------~~~~~~ISGT~iR~~L~~G~~~ 197 (214) T d1v47a2 172 PEG---H--------REKRTAISMTKVRALLREGKAP 197 (214) T ss_dssp CGG---G--------GGGCEECCHHHHHHHHHTTCCC T ss_pred CCC---C--------CCCCEECCHHHHHHHHHCCCCC T ss_conf 887---7--------6444550789999999875998 No 19 >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Probab=82.64 E-value=0.84 Score=22.35 Aligned_cols=90 Identities=8% Similarity=0.040 Sum_probs=47.2 Q ss_pred EEECCCCCCCCEEEEECCCCCCCCHHHHH-HHHHHHHHCCCCEEEEEECCCCCCCCC---CCCCCHHHHHHHHHHHCCCC Q ss_conf 02167789987899827789713389999-999999862998899997589987555---66889999999986310475 Q gi|254780649|r 10 IMRMPKVEPGMKIGLFGGNFNPPHHGHIE-IAQIAIKKLNLDQLWWIITPFNSVKNY---NLSSSLEKRISLSQSLIKNP 85 (216) Q Consensus 10 ~~~~p~~~~~mkIgifGGSFdPiH~gHl~-ia~~~~~~l~ld~v~~ips~~~p~K~~---~~~~~~~~R~~m~~~~~~~~ 85 (216) .|..|......||||+||- -|. |.-.+..++++.-+.+-|.+..|-... ....++.+.-++.+.+.. . T Consensus 2 ~~~~~~~~~~~kigIlGgG-------QL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~-~ 73 (111) T d1kjqa2 2 LLGTALRPAATRVMLLGSG-------ELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVEL-E 73 (111) T ss_dssp CBCCTTSTTCCEEEEESCS-------HHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHH-H T ss_pred CCCCCCCCCCCEEEEEECC-------HHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEECCCCCHHHHHHHHHH-H T ss_conf 4378989999799999377-------9899999999988998999849999836551776899887899999999986-2 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHC Q ss_conf 3213425531000328999999720 Q gi|254780649|r 86 RIRITAFEAYLNHTETFHTILQVKK 110 (216) Q Consensus 86 ~i~v~~~E~~~~~syT~dtL~~lk~ 110 (216) ...|-++|.+.= .+++|..+.+ T Consensus 74 ~~DviT~E~EnI---~~~~L~~le~ 95 (111) T d1kjqa2 74 KPHYIVPEIEAI---ATDMLIQLEE 95 (111) T ss_dssp CCSEEEECSSCS---CHHHHHHHHH T ss_pred CCCEEEEEECCC---CHHHHHHHHH T ss_conf 775688873676---8999999997 No 20 >d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]} Probab=63.01 E-value=4.1 Score=18.36 Aligned_cols=59 Identities=15% Similarity=0.239 Sum_probs=36.0 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC------CCCCCCHHHHHHHHHHH Q ss_conf 8789982778971338999999999986299889999758998755------56688999999998631 Q gi|254780649|r 19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKN------YNLSSSLEKRISLSQSL 81 (216) Q Consensus 19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~------~~~~~~~~~R~~m~~~~ 81 (216) +.+||+-+ |--=.|.||+.+.+.|.+.. |.|+ +--..||..= ..+.-+.+.=+++|+.+ T Consensus 21 g~~ig~VP-TMGaLH~GHlsLi~~A~~~~--~~vv-vSIFVNP~QF~~~eD~~~YPr~l~~D~~~l~~~ 85 (282) T d1ihoa_ 21 GKRVALVP-TMGNLHDGHMKLVDEAKARA--DVVV-VSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKR 85 (282) T ss_dssp TCCEEEEE-ECSCCCHHHHHHHHHHHHHC--SEEE-EEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHT T ss_pred CCCEEEEC-CCCCHHHHHHHHHHHHHHHC--CCEE-EEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHC T ss_conf 99099982-87505489999999998748--9689-999736765764211212676388889999754 No 21 >d1luca_ c.1.16.1 (A:) Bacterial luciferase alpha chain, LuxA {Vibrio harveyi [TaxId: 669]} Probab=53.20 E-value=6.6 Score=17.16 Aligned_cols=35 Identities=26% Similarity=0.565 Sum_probs=23.9 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHH------HHCCCCEEEE Q ss_conf 7899827789713389999999999------8629988999 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAI------KKLNLDQLWW 54 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~------~~l~ld~v~~ 54 (216) ||.|+|--+++|+..++-...+..+ +.+++|.+|+ T Consensus 1 M~fg~f~~~~~~~~~~~~~~~~~~~~~a~~ae~~Gf~~~~~ 41 (355) T d1luca_ 1 MKFGNFLLTYQPPELSQTEVMKRLVNLGKASEGCGFDTVWL 41 (355) T ss_dssp CEEEEEECCCCCTTCCHHHHHHHHHHHHHHTGGGTCSEEEE T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE T ss_conf 91357668879999799999999999999999879989996 No 22 >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} Probab=51.72 E-value=6.2 Score=17.34 Aligned_cols=30 Identities=13% Similarity=-0.015 Sum_probs=22.9 Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCC Q ss_conf 899827789713389999999999862998 Q gi|254780649|r 21 KIGLFGGNFNPPHHGHIEIAQIAIKKLNLD 50 (216) Q Consensus 21 kIgifGGSFdPiH~gHl~ia~~~~~~l~ld 50 (216) +|+|||||=..+..-+...|.++-+.+.-. T Consensus 3 ~v~VF~~s~~~~~~~~~~~a~~lg~~la~~ 32 (179) T d1t35a_ 3 TICVFAGSNPGGNEAYKRKAAELGVYMAEQ 32 (179) T ss_dssp EEEEECCSSCCSSTHHHHHHHHHHHHHHHT T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHC T ss_conf 799986579995979999999999999987 No 23 >d1v8fa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Thermus thermophilus [TaxId: 274]} Probab=43.17 E-value=9.6 Score=16.23 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=34.6 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-----C-CCCCCCHHHHHHHHHHH Q ss_conf 78998277897133899999999998629988999975899875-----5-56688999999998631 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK-----N-YNLSSSLEKRISLSQSL 81 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K-----~-~~~~~~~~~R~~m~~~~ 81 (216) .+||+-+ |--=.|.||+.+++.|++.. |.|+ +--.+||.. + ..+.-+.+.=+++|+.+ T Consensus 17 ~~i~~VP-TMGaLH~GHlsLi~~a~~~~--~~vv-vSIFVNP~QF~~~eD~~~YPr~~~~D~~~l~~~ 80 (276) T d1v8fa_ 17 EGVGFVP-TMGYLHRGHLALVERARREN--PFVV-VSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA 80 (276) T ss_dssp SCEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEE-EEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT T ss_pred CCEEEEC-CCCCHHHHHHHHHHHHHHHC--CCEE-EEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHC T ss_conf 9889985-87607489999999999758--9789-999866766787101220564256349999857 No 24 >d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]} Probab=42.59 E-value=5.3 Score=17.71 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=22.4 Q ss_pred EEEEECCCCCC----CCHHHHHHHHHHHHH--CCCCEEEEE Q ss_conf 89982778971----338999999999986--299889999 Q gi|254780649|r 21 KIGLFGGNFNP----PHHGHIEIAQIAIKK--LNLDQLWWI 55 (216) Q Consensus 21 kIgifGGSFdP----iH~gHl~ia~~~~~~--l~ld~v~~i 55 (216) ++.+|-| ||| .|.||+-.....+.. ++. .++++ T Consensus 31 ~~~~Y~G-~DPTa~sLHlGhlv~l~~l~~~q~~Gh-~~i~L 69 (323) T d1jila_ 31 QVTLYCG-ADPTADSLHIGHLLPFLTLRRFQEHGH-RPIVL 69 (323) T ss_dssp CCEEEEE-ECCSSSSCBHHHHHHHHHHHHHHHTTC-EEEEE T ss_pred CCEEEEC-CCCCCCCCCHHHHHHHHHHHHHHHHCC-CEEEE T ss_conf 9479973-068976320878999999999999399-60786 No 25 >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Probab=39.94 E-value=11 Score=15.94 Aligned_cols=16 Identities=44% Similarity=0.615 Sum_probs=11.9 Q ss_pred CEEEEECCCCCCCCHH Q ss_conf 7899827789713389 Q gi|254780649|r 20 MKIGLFGGNFNPPHHG 35 (216) Q Consensus 20 mkIgifGGSFdPiH~g 35 (216) |||++++..|-|...| T Consensus 1 MkIl~~~~~~pP~~~G 16 (437) T d2bisa1 1 MKVLLLGFEFLPVKVG 16 (437) T ss_dssp CEEEEECSCCTTCCSS T ss_pred CEEEEECCCCCCCCCC T ss_conf 9879987745884558 No 26 >d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]} Probab=39.51 E-value=5.7 Score=17.52 Aligned_cols=36 Identities=8% Similarity=0.019 Sum_probs=23.7 Q ss_pred HHEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC Q ss_conf 3202167789987899827789713389999999999862 Q gi|254780649|r 8 QDIMRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL 47 (216) Q Consensus 8 ~~~~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l 47 (216) ..+=.|-|.++|+|+|||||+= .|+-.++..+.+.. T Consensus 32 r~ID~l~PigrGQr~~I~g~~g----~GKT~l~~~i~~~~ 67 (289) T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPK----AGKTMLLQNIAQSI 67 (289) T ss_dssp HHHHHHSCCBTTCEEEEEECSS----SSHHHHHHHHHHHH T ss_pred EEEEECCCCCCCCEEEEECCCC----CCHHHHHHHHHHHH T ss_conf 3564125645787556867999----88789999999977 No 27 >d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]} Probab=36.25 E-value=5.2 Score=17.78 Aligned_cols=45 Identities=22% Similarity=0.215 Sum_probs=28.5 Q ss_pred ECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCEEEEEECCCC Q ss_conf 167789987899827789713389999999999862---9988999975899 Q gi|254780649|r 12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL---NLDQLWWIITPFN 60 (216) Q Consensus 12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l---~ld~v~~ips~~~ 60 (216) .|-|..+|+|+|||||+ -.|+-.++....... +-+.++++-.+.. T Consensus 61 ~l~pigkGQr~~If~~~----g~GKt~l~~~i~~~~~~~~~~v~V~~~iGer 108 (276) T d2jdid3 61 LLAPYAKGGKIGLFGGA----GVGKTVLIMELINNVAKAHGGYSVFAGVGER 108 (276) T ss_dssp HHSCEETTCEEEEEECT----TSSHHHHHHHHHHHHTTTCSSEEEEEEESCC T ss_pred EECCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHCCCEEEEEEECCC T ss_conf 02563678877766799----9898999999999887617996999995557 No 28 >d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Probab=35.67 E-value=13 Score=15.54 Aligned_cols=40 Identities=8% Similarity=-0.080 Sum_probs=27.2 Q ss_pred CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH Q ss_conf 9889999758998755566889999999986310475321342 Q gi|254780649|r 49 LDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITA 91 (216) Q Consensus 49 ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~ 91 (216) -.+++++|++.||- -...+.++|.++++.+.++.-+.|+| T Consensus 173 ~~~~~~~~~p~NPT---G~~~s~~~~~~l~~~a~~~~~~ii~D 212 (397) T d3tata_ 173 RSIVLLHPCCHNPT---GADLTNDQWDAVIEILKARELIPFLD 212 (397) T ss_dssp SCCCEECSSSCSSS---CCCCCHHHHHHHHHHHHHTTCCCEEC T ss_pred CCEEEEECCCCCCC---CEECCHHHHHHHHHHHHHCCEEEEEE T ss_conf 52899826899997---84178899999999985369469941 No 29 >d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]} Probab=34.63 E-value=13 Score=15.44 Aligned_cols=29 Identities=14% Similarity=0.027 Sum_probs=20.5 Q ss_pred CE-EEEECCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 78-998277897133899999999998629 Q gi|254780649|r 20 MK-IGLFGGNFNPPHHGHIEIAQIAIKKLN 48 (216) Q Consensus 20 mk-IgifGGSFdPiH~gHl~ia~~~~~~l~ 48 (216) || |++||||=..+.......|..+-+.+. T Consensus 1 mk~V~Vfgss~~~~~~~~~~~a~~lG~~la 30 (171) T d1weha_ 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLA 30 (171) T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHH T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHH T ss_conf 988999915899989989999999999999 No 30 >d1e4ea1 c.30.1.2 (A:2-131) D-alanine:D-lactate ligase VanA, N-domain {Enterococcus faecium [TaxId: 1352]} Probab=34.59 E-value=13 Score=15.44 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=33.1 Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEE---ECCCCCC Q ss_conf 8789982778971338999999999986299889999---7589987 Q gi|254780649|r 19 GMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWI---ITPFNSV 62 (216) Q Consensus 19 ~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~i---ps~~~p~ 62 (216) .|||||+.|=..+=|.-=+.-|..+.+.+.-++.-.. ++....+ T Consensus 2 K~kV~vl~GG~S~EheVSl~Sa~~v~~~L~~~~y~v~~i~i~k~g~w 48 (130) T d1e4ea1 2 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITKSGVW 48 (130) T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECTTSCE T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCE T ss_conf 71899996878600698999899999863334405799874588717 No 31 >d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]} Probab=33.46 E-value=14 Score=15.33 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=23.2 Q ss_pred CEEEEECCCCCC----CCHHHHHHHHHHHHHCCC-CEEEEEECCCC Q ss_conf 789982778971----338999999999986299-88999975899 Q gi|254780649|r 20 MKIGLFGGNFNP----PHHGHIEIAQIAIKKLNL-DQLWWIITPFN 60 (216) Q Consensus 20 mkIgifGGSFdP----iH~gHl~ia~~~~~~l~l-d~v~~ips~~~ 60 (216) -++.+|-| |+| .|.||+-.+......... .++++++...+ T Consensus 32 ~~~~vY~G-~~PTg~sLHlGh~v~~~~~~~lq~~g~~~~~~iad~~ 76 (343) T d1h3fa1 32 RPLTVKLG-ADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFT 76 (343) T ss_dssp SCCEEEEE-ECTTCCSCBHHHHHHHHHHHHHHHTTCEEEEEECCCC T ss_pred CCCEEEEE-ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHH T ss_conf 99779982-5689975209999999999999987994699970425 No 32 >d1fyea_ c.23.16.4 (A:) Aspartyl dipeptidase PepE {Salmonella typhimurium [TaxId: 90371]} Probab=32.71 E-value=14 Score=15.26 Aligned_cols=96 Identities=9% Similarity=0.110 Sum_probs=49.8 Q ss_pred CEEEEECCCCCC----CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH Q ss_conf 789982778971----3389999999999862998899997589987555668899999999863104753213425531 Q gi|254780649|r 20 MKIGLFGGNFNP----PHHGHIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITAFEAY 95 (216) Q Consensus 20 mkIgifGGSFdP----iH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~~E~~ 95 (216) ||+-+...++-| .....=.+++.+.. -.+|.+||+..+.. +.....+..+..+....+++..+... T Consensus 1 M~llL~S~~~~~gg~~l~~~~~~l~~~~~~---~~~i~~IPtAs~~~-------~~~~y~~~~~~~~~~l~~~v~~l~~~ 70 (229) T d1fyea_ 1 MELLLLSNSTLPGKAWLEHALPLIANQLNG---RRSAVFIPFAGVTQ-------TWDEYTDKTAEVLAPLGVNVTGIHRV 70 (229) T ss_dssp CEEEEESCSCCTTSCTTTTTHHHHHHHHTT---CCEEEEECTTCCSS-------CHHHHHHHHHHHHGGGTCEEEEGGGS T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHCC---CCEEEEECCCCCCC-------CHHHHHHHHHHHHHHCCCEEEEECCC T ss_conf 929997477568862699999999987479---97599987899888-------62599999999864427514784145 Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH Q ss_conf 0003289999997201367843896168813577777619 Q gi|254780649|r 96 LNHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQWHHW 135 (216) Q Consensus 96 ~~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W~~~ 135 (216) . +.+..+ .+++.+|+-|-|++.-+..|++. T Consensus 71 ~------~~~~~l----~~ad~I~v~GGn~~~l~~~l~~t 100 (229) T d1fyea_ 71 A------DPLAAI----EKAEIIIVGGGNTFQLLKESRER 100 (229) T ss_dssp S------CHHHHH----HHCSEEEECCSCHHHHHHHHHHT T ss_pred C------CHHHHH----HHCCEEEECCCCHHHHHHHHHHC T ss_conf 4------588998----64999999688899999999708 No 33 >d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Probab=32.38 E-value=6.2 Score=17.31 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=22.5 Q ss_pred CEEEEECCCCCC----CCHHHHHHHHHHHHH--CCCCEEEEE Q ss_conf 789982778971----338999999999986--299889999 Q gi|254780649|r 20 MKIGLFGGNFNP----PHHGHIEIAQIAIKK--LNLDQLWWI 55 (216) Q Consensus 20 mkIgifGGSFdP----iH~gHl~ia~~~~~~--l~ld~v~~i 55 (216) .++.+|-| ||| .|.||+-.....+.. .+. .++++ T Consensus 29 ~~~~~Y~G-~DPTa~sLHlGhlv~l~~l~~~q~~Gh-~~i~L 68 (319) T d2ts1a_ 29 ERVTLYCG-FDPTADSLHIGHLATILTMRRFQQAGH-RPIAL 68 (319) T ss_dssp SCCEEEEE-ECCSSSSCBGGGHHHHHHHHHHHHTTC-EEEEE T ss_pred CCCEEEEE-ECCCCCCCHHHHHHHHHHHHHHHHCCC-CEEEE T ss_conf 99669980-268987520878999999999998099-61687 No 34 >d2r5fa1 c.124.1.8 (A:59-316) Transcriptional regulator PSPTO2395 {Pseudomonas syringae [TaxId: 317]} Probab=30.22 E-value=16 Score=15.01 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=21.7 Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCC Q ss_conf 9999999998629988999975899 Q gi|254780649|r 36 HIEIAQIAIKKLNLDQLWWIITPFN 60 (216) Q Consensus 36 Hl~ia~~~~~~l~ld~v~~ips~~~ 60 (216) |+.+.+.+.++|+|.+++++|+..+ T Consensus 4 ~~eLe~~L~~kfgL~~~~Vvp~~~~ 28 (258) T d2r5fa1 4 HLELETRLQKMYGIRQVIVVEATEP 28 (258) T ss_dssp THHHHHHHHHHHTCSEEEEECCSST T ss_pred CHHHHHHHHHHHCCCEEEEECCCCC T ss_conf 6999999999719988999679999 No 35 >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Probab=29.59 E-value=11 Score=15.93 Aligned_cols=38 Identities=18% Similarity=0.153 Sum_probs=23.0 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHH--HCCCCEEEEEECCCCC Q ss_conf 78998277897133899999999998--6299889999758998 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIK--KLNLDQLWWIITPFNS 61 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~--~l~ld~v~~ips~~~p 61 (216) |||||.|+|= +.=.++++.+.+ .+...++..+-+.... T Consensus 1 mKVaIiGATG----yvG~eLi~lLl~~~~~p~~~i~~~ss~~~~ 40 (147) T d1mb4a1 1 MRVGLVGWRG----MVGSVLMQRMVEERDFDLIEPVFFSTSQIG 40 (147) T ss_dssp CEEEEESCSS----HHHHHHHHHHHHTTGGGGSEEEEEESSCCS T ss_pred CEEEEECCCC----HHHHHHHHHHHHCCCCCCEEEEEECCCCCC T ss_conf 9799999845----999999999995689994688982144456 No 36 >d2nx2a1 c.129.1.2 (A:1-177) Hypothetical protein YpsA {Bacillus subtilis [TaxId: 1423]} Probab=28.65 E-value=17 Score=14.85 Aligned_cols=52 Identities=4% Similarity=0.084 Sum_probs=36.4 Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH-----HHHHHHHHHCCEEEE-ECCCC Q ss_conf 3289999997201367843896168813577777-----619999975898999-38998 Q gi|254780649|r 99 TETFHTILQVKKHNKSVNFVWIMGADNIKSFHQW-----HHWKRIVTTVPIAII-DRFDV 152 (216) Q Consensus 99 syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W-----~~~~~ll~~~~iiV~-~R~g~ 152 (216) ..+.+++..+|+.||+.++..++=..++.. +| ..+++|++.+++++. ....+ T Consensus 56 ~~aAevvl~lk~~yp~ikL~~~lPf~~~~~--~w~e~~~~~y~~ll~~aD~v~~vs~~~y 113 (177) T d2nx2a1 56 LWAAEAAYDLQEEYPDLKVAVITPFYEQEK--NWKEPNKEQYEAVLAQADYEASLTHRPY 113 (177) T ss_dssp HHHHHHHHTTTTTCTTCEEEEEESSBCTTT--TSCHHHHHHHHHHHHHCSEEEESSSSBC T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCC--CCCHHHHHHHHHHHHHCCEEEEECCCCC T ss_conf 999999999850378835999864613043--8998999999999962998998144788 No 37 >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} Probab=28.45 E-value=17 Score=14.83 Aligned_cols=83 Identities=17% Similarity=0.158 Sum_probs=44.0 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEE-EEEECCCCCCCCCCCCCCHHHHH-HHHHHHC-CCCCCCCCHHHHHH Q ss_conf 789982778971338999999999986299889-99975899875556688999999-9986310-47532134255310 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQL-WWIITPFNSVKNYNLSSSLEKRI-SLSQSLI-KNPRIRITAFEAYL 96 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v-~~ips~~~p~K~~~~~~~~~~R~-~m~~~~~-~~~~i~v~~~E~~~ 96 (216) ||||||-.- .|=+.+++++++.+.-..+ ++-=+...|.-. +......+|. ++++-+. .+.++.|-.+ T Consensus 1 mkIgifDSG-----iGGLtVl~~l~~~lP~~~~iY~~D~a~~PYG~-ks~~~I~~~~~~~~~~l~~~~~~~iViAC---- 70 (105) T d1b74a1 1 MKIGIFDSG-----VGGLTVLKAIRNRYRKVDIVYLGDTARVPYGI-RSKDTIIRYSLECAGFLKDKGVDIIVVAC---- 70 (105) T ss_dssp CEEEEEESS-----STHHHHHHHHHHHSSSCEEEEEECGGGCCGGG-SCHHHHHHHHHHHHHHHHTTTCSEEEECC---- T ss_pred CEEEEEECC-----CCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEEC---- T ss_conf 979998389-----78799999999978999879985688798898-99999999999999999974999899805---- Q ss_pred HHHHHHHHHHHHHCCCC Q ss_conf 00328999999720136 Q gi|254780649|r 97 NHTETFHTILQVKKHNK 113 (216) Q Consensus 97 ~~syT~dtL~~lk~~~p 113 (216) ++ -|...+..|++.++ T Consensus 71 NT-aS~~al~~lr~~~~ 86 (105) T d1b74a1 71 NT-ASAYALERLKKEIN 86 (105) T ss_dssp HH-HHHHHHHHHHHHSS T ss_pred CC-HHHHHHHHHHHHCC T ss_conf 71-78999999998789 No 38 >d3efba1 c.124.1.8 (A:11-265) Sor-operon regulator SorC {Shigella flexneri [TaxId: 623]} Probab=27.12 E-value=18 Score=14.69 Aligned_cols=81 Identities=7% Similarity=0.005 Sum_probs=38.9 Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCC--CCCCCCHHHHHHHHHHHH-HHHHHHHCCC Q ss_conf 9999999998629988999975899875556688999999998631047--532134255310003289-9999972013 Q gi|254780649|r 36 HIEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKN--PRIRITAFEAYLNHTETF-HTILQVKKHN 112 (216) Q Consensus 36 Hl~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~--~~i~v~~~E~~~~~syT~-dtL~~lk~~~ 112 (216) ++.+.+++.++|+|.+++++|+..+. +...+..+.++|++- ..+.-.+ -+......|. .+..+|.+.. T Consensus 2 ~~~Le~~L~~~fgL~~~~Vv~~~~~~--------~~~~~~~lg~aAA~~l~~~l~~~~-~igvswG~T~~~~~~~l~~~~ 72 (255) T d3efba1 2 NLWLEQQLKQKFGLKDVVVVSGNDED--------EETQLAMMGLHGAQLLDRLLEPGD-IVGFSWGRAVSALVENLPQAG 72 (255) T ss_dssp CHHHHHHHHHHHTCSEEEEECCCSCC--------HHHHHHHHHHHHHHHHHHHCCTTC-EEEECCSHHHHHHHHTCCCCS T ss_pred CHHHHHHHHHHHCCCEEEEECCCCCC--------CHHHHHHHHHHHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCCC T ss_conf 28999999998399889997799876--------068999999999999998678998-899938688999999822003 Q ss_pred --CCCCEEEECCCCC Q ss_conf --6784389616881 Q gi|254780649|r 113 --KSVNFVWIMGADN 125 (216) Q Consensus 113 --p~~~l~fiiG~D~ 125 (216) .+..++.++|.+. T Consensus 73 ~~~~~~~v~l~G~~~ 87 (255) T d3efba1 73 QSRQLICVPIIGGPS 87 (255) T ss_dssp SCCCCEEEESBCBCT T ss_pred CCCCCEEEEECCCCC T ss_conf 467816998146767 No 39 >d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Probab=26.51 E-value=18 Score=14.62 Aligned_cols=41 Identities=12% Similarity=0.073 Sum_probs=27.0 Q ss_pred CCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH Q ss_conf 99889999758998755566889999999986310475321342 Q gi|254780649|r 48 NLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITA 91 (216) Q Consensus 48 ~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~ 91 (216) .-..+++++++.||- -...+.++|.+++.+|.++.-+.|+| T Consensus 168 ~~~~i~~~~~p~NPT---G~~~s~e~~~~l~~la~~~~~~ii~D 208 (394) T d2ay1a_ 168 KGDMVLLHGCCHNPT---GANLTLDQWAEIASILEKTGALPLID 208 (394) T ss_dssp TTCEEEEESSSCTTT---CCCCCHHHHHHHHHHHHHHTCEEEEE T ss_pred CCCEEEEECCCCCCC---CCCCCHHHHHHHHHHHHCCEEEEEEE T ss_conf 686899947999989---99899999999998753042899875 No 40 >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} Probab=26.39 E-value=15 Score=15.12 Aligned_cols=43 Identities=9% Similarity=0.120 Sum_probs=27.6 Q ss_pred CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC Q ss_conf 899878998277897133899999999998629988999975899875 Q gi|254780649|r 16 VEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSVK 63 (216) Q Consensus 16 ~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~K 63 (216) ++..+||||.|+|= +.=.++++.+.++=.+ ++..+-+..+..| T Consensus 2 s~~kikVaIlGATG----yvG~elirLL~~HP~~-ei~~l~S~~~aG~ 44 (183) T d2cvoa1 2 SGEEVRIAVLGASG----YTGAEIVRLLANHPQF-RIKVMTADRKAGE 44 (183) T ss_dssp CSSCEEEEEESCSS----HHHHHHHHHHTTCSSE-EEEEEECSTTTTS T ss_pred CCCCCEEEEECCCC----HHHHHHHHHHHHCCCC-EEEEEECCCCCCC T ss_conf 99820799989664----8999999999828994-6998742465897 No 41 >d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]} Probab=25.23 E-value=9.8 Score=16.17 Aligned_cols=22 Identities=9% Similarity=0.138 Sum_probs=16.0 Q ss_pred ECCCCCCCCEEEEECCCCCCCC Q ss_conf 1677899878998277897133 Q gi|254780649|r 12 RMPKVEPGMKIGLFGGNFNPPH 33 (216) Q Consensus 12 ~~p~~~~~mkIgifGGSFdPiH 33 (216) .|-+..+|+|+|||||+-=+-+ T Consensus 61 ~l~pig~GQr~~If~~~g~GKt 82 (285) T d2jdia3 61 SLVPIGRGQRELIIGDRQTGKT 82 (285) T ss_dssp HHSCCBTTCBCEEEESTTSSHH T ss_pred CCCCCCCCCEEEEECCCCCCHH T ss_conf 3467667877876568888858 No 42 >d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Probab=25.14 E-value=19 Score=14.47 Aligned_cols=38 Identities=11% Similarity=0.153 Sum_probs=26.4 Q ss_pred CEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC Q ss_conf 88999975899875556688999999998631047532134 Q gi|254780649|r 50 DQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRIT 90 (216) Q Consensus 50 d~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~ 90 (216) -++++++++.||- -...+.+++.++++.+.++.-+.|+ T Consensus 165 ~~~i~l~~P~NPT---G~v~s~~~l~~l~~~a~~~~~~ii~ 202 (394) T d1c7na_ 165 NKALLFCSPHNPV---GRVWKKDELQKIKDIVLKSDLMLWS 202 (394) T ss_dssp EEEEEEESSBTTT---TBCCCHHHHHHHHHHHHHSSCEEEE T ss_pred CEEEEECCCCCCC---CEECCHHHHHHHHCCCCCCCEEEEC T ss_conf 3299945523565---4125699953432034543205861 No 43 >d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=24.77 E-value=20 Score=14.43 Aligned_cols=29 Identities=21% Similarity=0.111 Sum_probs=22.1 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 78998277897133899999999998629 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLN 48 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ 48 (216) .||+|||||=.+...-+...|.++-+.+. T Consensus 3 k~v~Vf~gs~~~~~~~~~~~a~~lg~~La 31 (181) T d1ydhb_ 3 RKICVFCGSHSGHREVFSDAAIELGNELV 31 (181) T ss_dssp SEEEEECCSCCCSSTHHHHHHHHHHHHHH T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHH T ss_conf 67999865789959789999999999999 No 44 >d2okga1 c.124.1.8 (A:89-338) Central glycolytic gene regulator CggR {Bacillus subtilis [TaxId: 1423]} Probab=24.10 E-value=20 Score=14.36 Aligned_cols=92 Identities=10% Similarity=0.039 Sum_probs=43.7 Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC--------CCCCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999999862998899997589987555668899999999863104--------7532134255310003289999997 Q gi|254780649|r 37 IEIAQIAIKKLNLDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIK--------NPRIRITAFEAYLNHTETFHTILQV 108 (216) Q Consensus 37 l~ia~~~~~~l~ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~--------~~~i~v~~~E~~~~~syT~dtL~~l 108 (216) ..+.+.+.++|+|.+++++|+..+. .+. .+-.+.+++++ +..+-|+ | |+ -...+..++ T Consensus 7 ~~Le~~L~~kfgLk~~~Vv~~~~~~-------~~~-~~~~l~~aaA~~L~~~l~~~~~igvs-w----G~-T~~~~~~~l 72 (250) T d2okga1 7 TLLEKTLKERLNLKDAIIVSGDSDQ-------SPW-VKKEMGRAAVACMKKRFSGKNIVAVT-G----GT-TIEAVAEMM 72 (250) T ss_dssp HHHHHHHHHHSCCSEEEEESSCTTT-------CTH-HHHHHHHHHHHHHHHHCCSEEEEEEC-C----SH-HHHHHHHHC T ss_pred HHHHHHHHHHHCCCEEEEECCCCCC-------CHH-HHHHHHHHHHHHHHHHCCCCCEEEEE-C----CH-HHHHHHHHH T ss_conf 9999999998399889996689887-------569-99999999999999866799889995-8----78-999999984 Q ss_pred HCC--CCCCCEEEECCCCCH-HHHHHHHHHHHHHHHC Q ss_conf 201--367843896168813-5777776199999758 Q gi|254780649|r 109 KKH--NKSVNFVWIMGADNI-KSFHQWHHWKRIVTTV 142 (216) Q Consensus 109 k~~--~p~~~l~fiiG~D~l-~~l~~W~~~~~ll~~~ 142 (216) ... +++..++-++|.+.- .....+.-...+.+.+ T Consensus 73 ~~~~~~~~~~~V~l~G~~~~~~~~~~~~i~~~la~~~ 109 (250) T d2okga1 73 TPDSKNRELLFVPARGGLGEDVKNQANTICAHMAEKA 109 (250) T ss_dssp CCCTTCCEEEEEESEEECC---CCHHHHHHHHHHHHH T ss_pred HCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC T ss_conf 1105688728998217888776759999999999872 No 45 >d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]} Probab=23.50 E-value=21 Score=14.29 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=25.6 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC Q ss_conf 987899827789713389999999999862998899997589987 Q gi|254780649|r 18 PGMKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWWIITPFNSV 62 (216) Q Consensus 18 ~~mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ips~~~p~ 62 (216) .+.+||+- .|--=.|.||+.+.+.|.+.-+ |.|+. --..||. T Consensus 28 ~g~~i~~V-PTMGaLH~GHlsLi~~a~~~~~-~~vvv-SIFVNP~ 69 (286) T d2a84a1 28 TGRRVMLV-PTMGALHEGHLALVRAAKRVPG-SVVVV-SIFVNPM 69 (286) T ss_dssp TTCCEEEE-EECSSCCHHHHHHHHHHHTSTT-CEEEE-EECCCCC T ss_pred HCCEEEEE-ECCCCHHHHHHHHHHHHHHCCC-CEEEE-EEEECCC T ss_conf 29908999-3886341899999999864379-87999-9864665 No 46 >d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=23.36 E-value=21 Score=14.27 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=23.4 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCC Q ss_conf 78998277897133899999999998629 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLN 48 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ 48 (216) .||+|||||=.+...-+...|..+-+.+. T Consensus 7 k~v~Vf~gs~~~~~~~~~~~a~~lg~~la 35 (183) T d2q4oa1 7 RRICVFCGSSQGKKSSYQDAAVDLGNELV 35 (183) T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHH T ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHH T ss_conf 61899875799959789999999999999 No 47 >d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Probab=22.02 E-value=22 Score=14.11 Aligned_cols=40 Identities=10% Similarity=0.045 Sum_probs=27.3 Q ss_pred CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCH Q ss_conf 9889999758998755566889999999986310475321342 Q gi|254780649|r 49 LDQLWWIITPFNSVKNYNLSSSLEKRISLSQSLIKNPRIRITA 91 (216) Q Consensus 49 ld~v~~ips~~~p~K~~~~~~~~~~R~~m~~~~~~~~~i~v~~ 91 (216) -.++++++++.||- ....+.++|-++++.|.++.-+.|+| T Consensus 175 ~~~~iii~~p~NPT---G~~~s~e~~~~l~~~a~~~~~~ii~D 214 (401) T d7aata_ 175 KSIILLHACAHNPT---GVDPRQEQWKELASVVKKRNLLAYFD 214 (401) T ss_dssp TCEEEEESSSCTTT---CCCCCHHHHHHHHHHHHHTTCEEEEE T ss_pred CEEEEEECCCCCCC---CCCCCHHHHHHHHHHHHCCEEEEEEE T ss_conf 61899964788985---54589999999999873563799986 No 48 >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Probab=21.97 E-value=22 Score=14.11 Aligned_cols=53 Identities=6% Similarity=0.255 Sum_probs=35.4 Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHH----------------HHHHHHHHHCCEEEEEC Q ss_conf 003289999997201367843896168813577777----------------61999997589899938 Q gi|254780649|r 97 NHTETFHTILQVKKHNKSVNFVWIMGADNIKSFHQW----------------HHWKRIVTTVPIAIIDR 149 (216) Q Consensus 97 ~~syT~dtL~~lk~~~p~~~l~fiiG~D~l~~l~~W----------------~~~~~ll~~~~iiV~~R 149 (216) +....++.+..+.+.+++..+.++.|.|....+.+. .+..+++..++++|++- T Consensus 209 g~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v~ps 277 (370) T d2iw1a1 209 GVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA 277 (370) T ss_dssp THHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECC T ss_pred CHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 033320111233233221000001122222232222222222222222332334442223333444322 No 49 >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=21.50 E-value=18 Score=14.60 Aligned_cols=29 Identities=24% Similarity=0.323 Sum_probs=16.5 Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE Q ss_conf 78998277897133899999999998629988999 Q gi|254780649|r 20 MKIGLFGGNFNPPHHGHIEIAQIAIKKLNLDQLWW 54 (216) Q Consensus 20 mkIgifGGSFdPiH~gHl~ia~~~~~~l~ld~v~~ 54 (216) |||||.||+=+ .| ..+|..+.+. + .+|.+ T Consensus 1 Mki~vigGaG~---iG-~alA~~la~~-G-~~V~l 29 (212) T d1jaya_ 1 MRVALLGGTGN---LG-KGLALRLATL-G-HEIVV 29 (212) T ss_dssp CEEEEETTTSH---HH-HHHHHHHHTT-T-CEEEE T ss_pred CEEEEEECCCH---HH-HHHHHHHHHC-C-CEEEE T ss_conf 97999948839---99-9999999987-9-98999 No 50 >d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]} Probab=21.47 E-value=21 Score=14.29 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=23.4 Q ss_pred HHHEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC Q ss_conf 23202167789987899827789713389999999999862 Q gi|254780649|r 7 LQDIMRMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL 47 (216) Q Consensus 7 ~~~~~~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l 47 (216) .+....|++.+.+ .|++||||=..+-..+.+.|..+-+.+ T Consensus 22 ~~~~~~~~~~~~~-~V~Vfgsa~~~~~~~~y~~A~~LG~~L 61 (208) T d1weka_ 22 VEGFETLSELQVP-LVSVFGSARFGEGHPAYEAGYRLGRAL 61 (208) T ss_dssp HHHHHHHHHCCSC-EEEEECCSSCCTTSHHHHHHHHHHHHH T ss_pred HHHHHHHHHCCCC-EEEEECCCCCCCCCHHHHHHHHHHHHH T ss_conf 8899998644998-699989778988586899999999999 No 51 >d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]} Probab=20.76 E-value=12 Score=15.63 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=20.6 Q ss_pred ECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC Q ss_conf 167789987899827789713389999999999862 Q gi|254780649|r 12 RMPKVEPGMKIGLFGGNFNPPHHGHIEIAQIAIKKL 47 (216) Q Consensus 12 ~~p~~~~~mkIgifGGSFdPiH~gHl~ia~~~~~~l 47 (216) .+-+..+|+|+|||||+ -.|+-.++..+.... T Consensus 60 ~l~pig~GQr~~Ifg~~----g~GKt~l~~~~~~~~ 91 (276) T d1fx0a3 60 AMIPVGRGQRELIIGDR----QTGKTAVATDTILNQ 91 (276) T ss_dssp TTSCCBTTCBCBEEESS----SSSHHHHHHHHHHTC T ss_pred CCCCCCCCCEEEECCCC----CCCHHHHHHHHHHHH T ss_conf 01454677667600677----888579999977654 Done!