HHsearch alignment for GI: 254780652 and conserved domain: pfam00274

Probab=100.00  E-value=0  Score=1078.32  Aligned_cols=335  Identities=50%  Similarity=0.824  Sum_probs=330.4

Q ss_pred             HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHEECCCCHHEEEEEECCHHHHHHCCCCCCCHH
Q ss_conf             99999999974799099914688775787885789998678875456410077802304643467788410004887467
Q gi|254780652|r    4 DLENSVAMMLQAGKGILAADESNATIQKRFKAIHLESTENSRRDYREMLFRAKDAMQYISSILLYEETLYQNAQDGTSFV   83 (339)
Q Consensus         4 eL~~~a~~~~~~gKGilAaDeS~gt~~Krl~~igventeenr~~~R~~l~tsp~~~~~IsGvILfeeTl~q~~~~g~~~~   83 (339)
T Consensus         1 EL~~~a~~~~~~gKGILAaDES~~T~~KRf~~igventeenRr~yRelLfttp~~~~~IsGvILfeETl~Q~~~dG~~f~   80 (348)
T pfam00274         1 ELIKTAKAIVAPGKGILAADESTGTIGKRLASIGVENTEENRRAYRQLLFTTPGLGEYISGVILFEETLYQKTDDGKPFV   80 (348)
T ss_pred             CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEECCHHHHHCCCCCCCCHH
T ss_conf             96899999817998388725776458777886499985566888877532577755511324531877503376898858


Q ss_pred             HHHHHCCCEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             98995798789942785421789998621578357999999854339555010002336778740888899899999999
Q gi|254780652|r   84 DLISSSGVLVGIKVDRGLKPYPLYPGEHITVGLDDLDVRLKQYKDAGARVAKWRVVLSVSDVLPSMTVVKANMHILARYA  163 (339)
Q Consensus        84 ~~l~~kGIvpgIKVDkGl~~l~g~~~e~~t~GLD~L~eR~~~y~~~Ga~faKwRaVi~i~~~~Ps~~~I~~na~~larYA  163 (339)
T Consensus        81 ~~L~~~GivpGIKVDkG~~~l~g~~~E~~T~GLDgL~eR~~~Y~~~GArFAKWRaVi~I~~~~PS~~~I~~Na~~LArYA  160 (348)
T pfam00274        81 DVLKEKGIVPGIKVDKGLVPLAGTDGETTTQGLDGLAERCAEYYKQGARFAKWRAVLKISPNTPSELAIEENANVLARYA  160 (348)
T ss_pred             HHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99985698553534778435899975420346456899999999769852201125552799985999999999999999


Q ss_pred             HHHHHCCCCCEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHH
Q ss_conf             999844787201101103775798999999999999999998763853111000025565764443-5898899877799
Q gi|254780652|r  164 VLCQNAGLVPIVEPEVLMEGDHTIERCAEVTEFVLRTLFNELYTMRVCFEGLVLKSNMILPGKSAP-QVSDEEIASNTIK  242 (339)
Q Consensus       164 ~i~Q~~GLVPIVEPEVl~dG~H~ie~~~~vte~vL~~lf~~L~~~~V~leg~lLKpnMv~pG~~~~-~~~~eevA~~T~~  242 (339)
T Consensus       161 ~icQ~~glVPIVEPEVlmdG~H~ie~~~~vt~~vl~~vf~~L~~~~V~LeG~lLKPnMV~pG~~~~~~~~~e~VA~~Tv~  240 (348)
T pfam00274       161 AICQQNGLVPIVEPEILLDGDHDLERCQEVTEKVLAAVFKALNDHHVMLEGTLLKPNMVTPGADCPKKATPEDVAEATVR  240 (348)
T ss_pred             HHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHH
T ss_conf             99986596220033131047656899999999999999999998498612522356602257768887999999999999


Q ss_pred             HHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             985028743862586058888999999899986278-9980599851078637889881899889999999999999741
Q gi|254780652|r  243 IFKRVVPCAVQGIAFLSGGQSEQDATARLSAMNSMG-DCPWRLSFSYGRALQESVLRAWNGKQDNVVVAQRVLSHRAHMN  321 (339)
Q Consensus       243 ~l~~~vP~~VpgIvFLSGGqs~eeAt~~LnaiNk~~-~~pW~lsfSygRALQ~~~Lk~W~G~~eN~~~aQ~~~~~Rak~n  321 (339)
T Consensus       241 ~l~~~VP~aVpGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRALQ~s~Lk~W~G~~eNv~aAQ~~l~~Ra~~N  320 (348)
T pfam00274       241 ALRRTVPPAVPGIVFLSGGQSEEEATLNLNAMNQLPLKKPWALSFSYGRALQASVLKAWGGKPENVKAAQEALLARAKAN  320 (348)
T ss_pred             HHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99863985478344368887589999999998636789998688727788619999980898788999999999999874


Q ss_pred             HHHHCCCCCCCCCCCCC
Q ss_conf             58978974867682125
Q gi|254780652|r  322 SLATKGCWKKSLENSNG  338 (339)
Q Consensus       322 s~A~~G~y~~~~e~~~~  338 (339)
T Consensus       321 s~A~~G~y~~~~e~~~~  337 (348)
T pfam00274       321 SLAQLGKYTGGGEGAAA  337 (348)
T ss_pred             HHHHCCCCCCCCCCCCC
T ss_conf             79875875777777555