HHSEARCH alignment of GI: 254780653 and SCOP domain: d16pka_

Alignment
>d16pka_ c.86.1.1 (A:) Phosphoglycerate kinase {Trypanosoma brucei [TaxId: 5691]}
Probab=100.00  E-value=0  Score=1013.68  Aligned_cols=394  Identities=37%  Similarity=0.665  Sum_probs=379.2

Q ss_pred             CCCCCHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC---------------
Q ss_conf             88771010015996899982016713185777258999988989999988980999913778889---------------
Q gi|254780653|r    3 RLRTMNDLRDIRGLRCLLRVDWNVPFIDGKVADVTRIERVVPTILELVEKKAKVVIFSHLGRPQS---------------   67 (400)
Q Consensus         3 ~~~ti~d~~d~~gk~VlvRvD~NvPi~~g~I~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg---------------   67 (400)
                      ..|||+|+ |++||+||||||||||+++|+|+|++||++++|||++|+++||||||+||||||||               
T Consensus         1 ~~ktl~d~-~~~~K~VlvRvD~NvPi~~g~I~d~~RI~~~~pTi~~ll~~~akvvl~SH~GRPkg~~~~~~~~~~~~~~~   79 (415)
T d16pka_           1 EKKSINEC-DLKGKKVLIRVDFNVPVKNGKITNDYRIRSALPTLKKVLTEGGSCVLMSHLGRPKGIPMAQAGKIRSTGGV   79 (415)
T ss_dssp             CBCBGGGS-CCTTCEEEEEECCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCCCBCGGGHHHHHHTTCC
T ss_pred             CCCCCCCC-CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99741013-87899899993467555599589738899999999999978897999905899898755532222222331


Q ss_pred             -CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCH----HHHHHHHCCCCCE
Q ss_conf             -84733224788887643101335456663102556655313646489824243034321000----2466531243642
Q gi|254780653|r   68 -KSDKDCSLFKVVSIAESILHKNILFVNDCIGSTLSQSIASLSEGGIILAENVRFYSEEERND----PDFVRMLSRNGDF  142 (400)
Q Consensus        68 -~~~~~~Sl~~v~~~l~~~l~~~V~fi~d~~g~~~~~~i~~l~~g~ilLLEN~Rf~~~E~~n~----~~f~k~La~laDi  142 (400)
                       ++++++||+||+++|+++|+++|.|++|+++..  .++++|++|+|+||||+|||+||+.|+    +.|+|+||++||+
T Consensus        80 ~~~~~~~sL~~~a~~L~~~l~~~V~f~~~~~~~~--~~i~~l~~g~i~LLEN~Rf~~eE~~~~~~~~~~fak~LA~laDi  157 (415)
T d16pka_          80 PGFQQKATLKPVAKRLSELLLRPVTFAPDCLNAA--DVVSKMSPGDVVLLENVRFYKEEGSKKAKDREAMAKILASYGDV  157 (415)
T ss_dssp             TTCCGGGCSHHHHHHHHHHHTSCCEEESCTTSCH--HHHHTCCTTCEEEECCGGGBGGGGCSSHHHHHHHHHHHHTTCSE
T ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH--HHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCE
T ss_conf             2368334738899999987586742344310244--56650577416874200024532322122138999998722868


Q ss_pred             EEECCHHHHCCCCCCEEECCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECH
Q ss_conf             475440440113763330233210003-3255657776533101667871899960780255788998773068888620
Q gi|254780653|r  143 YINDAFSVSHRAHASITGLSHLLPSYI-GRAMQKELSMLESCFSESKKPLVAIVGGSKVSTKITLLINLVKKVDKLVIGG  221 (400)
Q Consensus       143 yVnDAF~~aHR~haS~~gi~~~lps~a-G~l~ekEi~~L~~~l~~~~~P~v~IiGGaKisdKi~~i~~L~~k~D~iiigG  221 (400)
                      |||||||||||+|||++|||+++|+|+ |+|||+|+++|++++++|+||+++||||||++|||++|++|++++|+|++||
T Consensus       158 yVNDAFg~sHR~haS~~Gi~~~lps~~gg~L~ekEl~~L~~~l~~p~~P~~aIlGGaKisdKi~~i~~l~~k~D~iligG  237 (415)
T d16pka_         158 YISDAFGTAHRDSATMTGIPKILGNGAAGYLMEKEISYFAKVLGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGG  237 (415)
T ss_dssp             EEEECGGGTTSCCTTTTHHHHHHTCCEECHHHHHHHHHHHHHHSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECT
T ss_pred             EEECCCCHHHCCCCCEECCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECC
T ss_conf             99456202204675122200014224678999999999999970977551899853653437999998885365565322


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHH
Q ss_conf             57899999830143433331000013568899875302455430354113432323333102532120133457652003
Q gi|254780653|r  222 GMANSFLVAQGMGVGRSLCQRDFSDNVHQIAWEAKRSACEIIVPRDVVVAREMKTGIPTQVVSAQSVPLDSIILDVGFKT  301 (400)
Q Consensus       222 ~lantfL~A~G~~IG~Sl~e~~~~~~ak~i~~~a~~~~~~I~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~T  301 (400)
                      +||||||+|+|++||+|++|+++.+.+++++..+++++++|++|+|++|+.++.....+.+.+.+++|++|+++||||+|
T Consensus       238 ~~antfL~a~G~~iG~sl~e~~~~~~a~~i~~~~~~~~~~i~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIG~~T  317 (415)
T d16pka_         238 AMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVILPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKT  317 (415)
T ss_dssp             THHHHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEECCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             18889999809805544304443212666522321151678511203303101334443112222234543777787776


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCEEECCHHHH
Q ss_conf             56777640577679997662532274365889999999986111488589974804699899848876864687507998
Q gi|254780653|r  302 VEYIKQVIAQARTVMWNGPLGVFEIEPFDRATVEVAHYVAKLTKERRIISIAGGGDTITALAHAGISNEFTYVSTAGGAF  381 (400)
Q Consensus       302 i~~~~~~I~~AktI~WNGP~GvfE~~~F~~GT~~l~~~ia~~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTgGGA~  381 (400)
                      ++.|+++|++|+|||||||||+||+++|+.||.+|+++++++++++++|||||||||++|++++|+.++|+||||||||+
T Consensus       318 i~~~~~~I~~AktI~wNGP~GvfE~~~F~~GT~~l~~~ia~~t~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTGGGA~  397 (415)
T d16pka_         318 IEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRGTHEHGLMSIIGGGDSASAAELSGEAKRMSHVSTGGGAS  397 (415)
T ss_dssp             HHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHHHHHHCCEEEECSHHHHHHHHHTTCTTTSSEECSCHHHH
T ss_pred             HHHHHHHHHHHCEEEEECCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCCCCEEECCHHHH
T ss_conf             66776766513569996653213155151799999999998413479989987789999999719735870798778999


Q ss_pred             HHHHCCCCCHHHHHHCCC
Q ss_conf             998748998689884079
Q gi|254780653|r  382 LEWLEGKDLPGIVALSGH  399 (400)
Q Consensus       382 L~~L~G~~LPgi~aL~~~  399 (400)
                      |+||+|++||||+||++.
T Consensus       398 L~~L~G~~LPgi~aL~~k  415 (415)
T d16pka_         398 LELLEGKTLPGVTVLDDK  415 (415)
T ss_dssp             HHHHTTCCCHHHHTSCBC
T ss_pred             HHHHCCCCCCHHHHHHCC
T ss_conf             999879996257785069


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate kinase
superfamily: Phosphoglycerate kinase
family: Phosphoglycerate kinase
domain: Phosphoglycerate kinase
species: Trypanosoma brucei [TaxId: 5691]