HHSEARCH alignment of GI: 254780653 and SCOP domain: d1v6sa_

Alignment
>d1v6sa_ c.86.1.1 (A:) Phosphoglycerate kinase {Thermus thermophilus [TaxId: 274]}
Probab=100.00  E-value=0  Score=1030.58  Aligned_cols=390  Identities=40%  Similarity=0.659  Sum_probs=381.8

Q ss_pred             CCCCHHHHCCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             87710100159968999820167131857772589999889899999889809999137788898473322478888764
Q gi|254780653|r    4 LRTMNDLRDIRGLRCLLRVDWNVPFIDGKVADVTRIERVVPTILELVEKKAKVVIFSHLGRPQSKSDKDCSLFKVVSIAE   83 (400)
Q Consensus         4 ~~ti~d~~d~~gk~VlvRvD~NvPi~~g~I~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~~~~~~Sl~~v~~~l~   83 (400)
                      ||||+|+ |++|||||||+|||||++||+|+||+||++++|||++|+++||||||+||||||+|+ ++++||+||+++|+
T Consensus         1 mktl~d~-~~~~k~Vl~R~D~NvPi~~g~i~d~~RI~~~~pTI~~l~~~~akvii~SH~GRPkg~-~~~~Sl~~v~~~l~   78 (390)
T d1v6sa_           1 MRTLLDL-DPKGKRVLVRVDYNVPVQDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPKGP-DPKYSLAPVGEALR   78 (390)
T ss_dssp             CCBGGGS-CCTTCEEEEECCCCCCEETTEESCCHHHHHHHHHHHHHHHTTCEEEEECCCSCCSSC-CGGGCSHHHHHHHH
T ss_pred             CCCHHHC-CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCHHHHHHHHH
T ss_conf             9741225-878999999940377755990897689999999999999789989999558999998-97613799999997


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCHHHHCCCCCCCHHHHHHHHCCCCCEEEECCHHHHCCCCCCEEECCC
Q ss_conf             31013354566631025566553136464898242430343210002466531243642475440440113763330233
Q gi|254780653|r   84 SILHKNILFVNDCIGSTLSQSIASLSEGGIILAENVRFYSEEERNDPDFVRMLSRNGDFYINDAFSVSHRAHASITGLSH  163 (400)
Q Consensus        84 ~~l~~~V~fi~d~~g~~~~~~i~~l~~g~ilLLEN~Rf~~~E~~n~~~f~k~La~laDiyVnDAF~~aHR~haS~~gi~~  163 (400)
                      ++|+++|.|++|++++.+++.++.|++|+|+||||+|||+||++|++.|+++||++||+|||||||||||+|||++|||+
T Consensus        79 ~~l~~~v~~~~~~~~~~~~~~~~~l~~g~i~lLENvRF~~~E~~nd~~f~~~La~l~DiyVNDAF~~aHR~haS~vgi~~  158 (390)
T d1v6sa_          79 AHLPEARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGEEKNDPELSARYARLGEAFVLDAFGSAHRAHASVVGVAR  158 (390)
T ss_dssp             HHCTTEEECCSCTTSHHHHHHHHTCCTTCEEECSCGGGSTTTTTTCHHHHHHHGGGCSEEEECCGGGTTSCCCCCCCGGG
T ss_pred             HHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCHH
T ss_conf             52465326531011221222223466653786511232455211652777766524765896314666650566225013


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             21000332556577765331016678718999607802557889987730688886205789999983014343333100
Q gi|254780653|r  164 LLPSYIGRAMQKELSMLESCFSESKKPLVAIVGGSKVSTKITLLINLVKKVDKLVIGGGMANSFLVAQGMGVGRSLCQRD  243 (400)
Q Consensus       164 ~lps~aG~l~ekEi~~L~~~l~~~~~P~v~IiGGaKisdKi~~i~~L~~k~D~iiigG~lantfL~A~G~~IG~Sl~e~~  243 (400)
                      ++|||||+|||+|+++|++++++|+||+++||||||+||||++|++|++++|+|++||+||||||+|+|++||+|++|++
T Consensus       159 ~lps~aG~l~ekEi~~L~~~l~~~~rP~vaIlGGaKvsdKi~~i~~l~~k~D~iiigG~mAntFL~a~G~~IG~sl~e~~  238 (390)
T d1v6sa_         159 LLPAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEED  238 (390)
T ss_dssp             TSCEEECHHHHHHHHHHHTTTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHH
T ss_conf             33456689999999999999854467508998346402369999999975256666441779999975976686344311


Q ss_pred             CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             00135688998753024554303541134323233331025321201334576520035677764057767999766253
Q gi|254780653|r  244 FSDNVHQIAWEAKRSACEIIVPRDVVVAREMKTGIPTQVVSAQSVPLDSIILDVGFKTVEYIKQVIAQARTVMWNGPLGV  323 (400)
Q Consensus       244 ~~~~ak~i~~~a~~~~~~I~lP~D~~v~~~~~~~~~~~~~~~~~i~~~~~i~DIGp~Ti~~~~~~I~~AktI~WNGP~Gv  323 (400)
                      .++.++.+++.+++++++|++|.|++|+.++..+.+++.+++++||++|+++||||+|++.|+++|++|+|||||||||+
T Consensus       239 ~~~~~~~~~~~a~~~~~~i~lp~dv~~~~~~~~~~~~~~~~~~~i~~~~~ilDIG~~Ti~~~~~~I~~aktI~WNGPmGv  318 (390)
T d1v6sa_         239 RLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGV  318 (390)
T ss_dssp             GHHHHHHHHHHHHHHTCEEECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             46666767776543023333332112201236775323564333100244320001346778877502644899756445


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCHHHHHHCC
Q ss_conf             227436588999999998611148858997480469989984887686468750799899874899868988407
Q gi|254780653|r  324 FEIEPFDRATVEVAHYVAKLTKERRIISIAGGGDTITALAHAGISNEFTYVSTAGGAFLEWLEGKDLPGIVALSG  398 (400)
Q Consensus       324 fE~~~F~~GT~~l~~~ia~~~~~~~~~sivGGGdT~aai~~~g~~~~~~hvSTgGGA~L~~L~G~~LPgi~aL~~  398 (400)
                      ||+++|+.||.++++++++   .+++|||||||||++|++++|+.++|+||||||||||+||+|++||||+||+.
T Consensus       319 fE~~~F~~GT~~i~~aia~---~~~a~sIiGGGdT~aai~~~g~~~~fshVSTGGGA~Le~L~G~~LPgi~aL~~  390 (390)
T d1v6sa_         319 FEVPPFDEGTLAVGQAIAA---LEGAFTVVGGGDSVAAVNRLGLKERFGHVSTGGGASLEFLEKGTLPGLEVLEG  390 (390)
T ss_dssp             TTSTTTTHHHHHHHHHHHT---CSSCEEEEESHHHHHHHHTTTCGGGSSEECCSSSHHHHHHHHSCCHHHHTTCC
T ss_pred             CCCCCHHHHHHHHHHHHHH---CCCCEEEEECHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCCCCCCHHHHCC
T ss_conf             0257430799999999985---58997999488999999974986787179577899999977999642143159


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate kinase
superfamily: Phosphoglycerate kinase
family: Phosphoglycerate kinase
domain: Phosphoglycerate kinase
species: Thermus thermophilus [TaxId: 274]