HHsearch alignment for GI: 254780654 and conserved domain: CHL00194

>CHL00194 ycf39 Ycf39; Provisional.
Probab=93.96  E-value=0.38  Score=27.97  Aligned_cols=98  Identities=14%  Similarity=0.248  Sum_probs=55.3

Q ss_pred             EEEEEEC-CCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             1898856-686889999999968888728999606889999998875144125567408983653001656542110123
Q gi|254780654|r    3 CKVAING-FGRIGRCILRAAVESRRDDVRIVAINDLNSIETMAHLLRYDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIRD   81 (333)
Q Consensus         3 ikIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~~~Ll~yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~~   81 (333)
T Consensus         1 M~ILV~GATG~lGr~vVr~Ll~~---G~~Vr~lvR--np~ka~~l~-------~~G--ve------------~v~gDl~d   54 (319)
T CHL00194          1 MSLLVIGATGTLGRQIVRRALDE---GYQVKCLVR--NLRKAAFLK-------EWG--AE------------LVYGDLSL   54 (319)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHC---CCCEEEEEC--CHHHHHHHH-------HCC--CE------------EEEECCCC
T ss_conf             97999899858999999999968---890899957--867632342-------159--67------------99942788


Q ss_pred             CCCCC--CCCCCEEEEECCCCCCCCC-C------------CHHHHCCCCEEEE-ECCCCCC
Q ss_conf             33334--4656327860664333212-2------------0011058423433-0367887
Q gi|254780654|r   82 PQDLP--WGDVDVAMECTGFFVTQEK-A------------SLHLSNGSQRVLV-SAPCKGV  126 (333)
Q Consensus        82 p~~i~--W~~vDiViEcTG~f~~~~~-~------------~~HL~~GakkVIi-SaP~kd~  126 (333)
T Consensus        55 pesl~~Al~GvdaVi~~~~~~~~~~~~~~~vd~~g~~~li~AAk~aGVkr~V~lS~lga~~  115 (319)
T CHL00194         55 PETIPPALEGITAIIDASTSRPSDLNNAYQIDLEGKLALIEAAKAAKVKRFIFFSILNAEQ  115 (319)
T ss_pred             HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             7789999659967999456677886208898898899999999984998899961356666