HHsearch alignment for GI: 254780654 and conserved domain: COG2344

Probab=90.67  E-value=0.17  Score=30.30  Aligned_cols=101  Identities=24%  Similarity=0.320  Sum_probs=68.2

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             61898856686889999999968888728999606889999998875144125567408983653001656542110123
Q gi|254780654|r    2 VCKVAINGFGRIGRCILRAAVESRRDDVRIVAINDLNSIETMAHLLRYDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIRD   81 (333)
Q Consensus         2 ~ikIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~~~Ll~yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~~   81 (333)
T Consensus        84 ~tnviiVG~GnlG~All~Y~f~~-~~~~~iv~~FDv~~~-----------~VG~~~~~v~V--------------~~~d~  137 (211)
T COG2344          84 TTNVIIVGVGNLGRALLNYNFSK-KNGMKIVAAFDVDPD-----------KVGTKIGDVPV--------------YDLDD  137 (211)
T ss_pred             CEEEEEECCCHHHHHHHCCCCHH-HCCCEEEEEECCCHH-----------HHCCCCCCEEE--------------ECHHH
T ss_conf             03489990570888986074233-269359999617878-----------83752488145--------------52688


Q ss_pred             CCC-CCCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCCCCCE
Q ss_conf             333-34465632786066433321220011058423433036788734
Q gi|254780654|r   82 PQD-LPWGDVDVAMECTGFFVTQEKASLHLSNGSQRVLVSAPCKGVKK  128 (333)
Q Consensus        82 p~~-i~W~~vDiViEcTG~f~~~~~~~~HL~~GakkVIiSaP~kd~~~  128 (333)
T Consensus       138 le~~v~~~dv~iaiLtVPa~~AQ~vad~Lv~aGVkGIlNFtPv~l~~p  185 (211)
T COG2344         138 LEKFVKKNDVEIAILTVPAEHAQEVADRLVKAGVKGILNFTPVRLQVP  185 (211)
T ss_pred             HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCEEECCC
T ss_conf             888988617618999734898999999999838735884263575189