HHsearch alignment for GI: 254780654 and conserved domain: PRK11579

Probab=95.99  E-value=0.04  Score=34.41  Aligned_cols=93  Identities=17%  Similarity=0.258  Sum_probs=65.1

Q ss_pred             CEEEEEECCCHHHHH-HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             618988566868899-9999996888872899960688999999887514412556740898365300165654211012
Q gi|254780654|r    2 VCKVAINGFGRIGRC-ILRAAVESRRDDVRIVAINDLNSIETMAHLLRYDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIR   80 (333)
Q Consensus         2 ~ikIgINGfGRIGR~-v~R~~~~~~~~~i~ivaINd~~~~~~~~~Ll~yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~   80 (333)
T Consensus         4 ~irvgiiG~G~~~~~~h~~~~~~--~~~~~l~av~d~-~~~~~~a---------~~~---------------~~~~~--~   54 (346)
T PRK11579          4 KIRVGLIGYGYASKTFHAPLIAG--TPGLELAAVSSS-DETKVKA---------DWP---------------TVTVV--S   54 (346)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHC--CCCEEEEEEECC-CHHHHHC---------CCC---------------CCCEE--C
T ss_conf             87599993629999999999962--999199999798-9999950---------258---------------99538--9


Q ss_pred             CCCCC-CCCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEEECCCC
Q ss_conf             33333-446563278606643332122001105842343303678
Q gi|254780654|r   81 DPQDL-PWGDVDVAMECTGFFVTQEKASLHLSNGSQRVLVSAPCK  124 (333)
Q Consensus        81 ~p~~i-~W~~vDiViEcTG~f~~~~~~~~HL~~GakkVIiSaP~k  124 (333)
T Consensus        55 ~~~~ll~~~~id~V~i~tp~~~H~~~~~~al~aG-khv~~EKP~a   98 (346)
T PRK11579         55 EPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAG-KHVVVDKPFT   98 (346)
T ss_pred             CHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCC-CCEEECCCCC
T ss_conf             9999945999999999799678999999999879-9489538767