HHsearch alignment for GI: 254780654 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=95.60 E-value=0.11 Score=31.56 Aligned_cols=104 Identities=28% Similarity=0.402 Sum_probs=55.8
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCC---------CCHHHHHHHHHHCCCC-CCCCCEEEEECCCCCCCCC
Q ss_conf 18988566868899999999688887289996068---------8999999887514412-5567408983653001656
Q gi|254780654|r 3 CKVAINGFGRIGRCILRAAVESRRDDVRIVAINDL---------NSIETMAHLLRYDSVH-GRFPGEVKIIGDTIDVGLG 72 (333)
Q Consensus 3 ikIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~---------~~~~~~~~Ll~yDS~h-G~~~~~v~~~~~~l~in~~ 72 (333)
T Consensus 39 ~~vaIQGfGnVG~~aA~~l~e---~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~------- 108 (254)
T cd05313 39 KRVAISGSGNVAQYAAEKLLE---LGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGT------- 108 (254)
T ss_pred CEEEEECCCHHHHHHHHHHHH---CCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCC-------
T ss_conf 999998977999999999997---7997999985785088799998899999999997468710244413898-------
Q ss_pred CCCCCCCCCCCCCCCC-CCCEEEEECCC-CCCCCCCCHHHHCCCCEEEEEC
Q ss_conf 5421101233333446-56327860664-3332122001105842343303
Q gi|254780654|r 73 PIQVTSIRDPQDLPWG-DVDVAMECTGF-FVTQEKASLHLSNGSQRVLVSA 121 (333)
Q Consensus 73 ~i~i~~~~~p~~i~W~-~vDiViEcTG~-f~~~~~~~~HL~~GakkVIiSa 121 (333)
T Consensus 109 -~~~---~~-~~~~~~~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgA 154 (254)
T cd05313 109 -AKY---FE-GKKPWEVPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGA 154 (254)
T ss_pred -CEE---CC-CCCHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
T ss_conf -566---38-97513304769974354667899999999967982998658