HHsearch alignment for GI: 254780654 and conserved domain: pfam03447
>pfam03447 NAD_binding_3 Homoserine dehydrogenase, NAD binding domain. This domain adopts a Rossmann NAD binding fold. The C-terminal domain of homoserine dehydrogenase contributes a single helix to this structural domain, which is not included in the Pfam model.
Probab=97.08 E-value=0.0013 Score=44.08 Aligned_cols=85 Identities=27% Similarity=0.329 Sum_probs=52.5
Q ss_pred CCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 668688999999996888-8728999606889999998875144125567408983653001656542110123333-34
Q gi|254780654|r 9 GFGRIGRCILRAAVESRR-DDVRIVAINDLNSIETMAHLLRYDSVHGRFPGEVKIIGDTIDVGLGPIQVTSIRDPQD-LP 86 (333)
Q Consensus 9 GfGRIGR~v~R~~~~~~~-~~i~ivaINd~~~~~~~~~Ll~yDS~hG~~~~~v~~~~~~l~in~~~i~i~~~~~p~~-i~ 86 (333)
T Consensus 1 G~G~VG~~v~~~l~~~~~~~~~~l~~v~~r~~-------~~~~----~---~---------~~~~~~~~--~~d~~~ll~ 55 (116)
T pfam03447 1 GCGAIGSGLLELLLRQQEEIPLELVAVADRDL-------LSKA----R---A---------ALLGDEPV--TLDLDDLVA 55 (116)
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCH-------HHCC----C---C---------CCCCCCEE--ECCHHHHHC
T ss_conf 98702899999999492035679999984783-------4323----2---1---------24666715--779999961
Q ss_pred CCCCCEEEEECCCCCCCCCCCHHHHCCCCEEEE
Q ss_conf 465632786066433321220011058423433
Q gi|254780654|r 87 WGDVDVAMECTGFFVTQEKASLHLSNGSQRVLV 119 (333)
Q Consensus 87 W~~vDiViEcTG~f~~~~~~~~HL~~GakkVIi 119 (333)
T Consensus 56 ~~~iDvVVE~~g~~~~~~~~~~aL~~Gk-hVVT 87 (116)
T pfam03447 56 DPRPDVVVECASSEAVAEYVLKALKAGK-HVVT 87 (116)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHCCC-EEEE
T ss_conf 8899899988994899999999998799-8999