HHsearch alignment for GI: 254780655 and conserved domain: CHL00144
>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated.
Probab=100.00 E-value=3e-42 Score=324.87 Aligned_cols=295 Identities=14% Similarity=0.127 Sum_probs=224.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH-HCCCCCCCHHHHHHHHHHHHHCCCCCCEE-CCC
Q ss_conf 1346788899886554332203455567400026663445432001-00325762002356787998728876220-010
Q gi|254780655|r 367 RKSSELVLEVVNDCLPELIGGSADLTGSNGTKTSQMKAISKSDFSG-RYLHYGVREHAMAAAMNGIALHKGLAPYS-GTF 444 (673)
Q Consensus 367 r~a~g~~l~~i~~~~p~iv~~sADl~~St~~~~~~~~~~~~~~~p~-r~i~~GIaE~~~~~~aaGla~~~g~~p~~-~tf 444 (673)
T Consensus 7 ~~ai~~al~~~m~~d~~v~~~GeDv~~~gg~--f~~t~gl~~kfg~~Rv~dtpIaE~~~vG~A~GlA~-~G~rPiv~~~~ 83 (326)
T CHL00144 7 FEALREAIDEEMARDPRVAVIGEDVGHYGGS--YKVTKDLHPKYGDLRVLDTPIAENSFTGMAIGAAM-TGLRPVVEGMN 83 (326)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCCCCC--HHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHH-CCCEEEEEEEH
T ss_conf 9999999999997599889983776756780--67506799873855100677357889999998874-79979999746
Q ss_pred HHHHHHHHHHHH-HHHH------HHCCCEEECCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 035553001245-4111------100001302454333333331010002221011101221121120124577776520
Q gi|254780655|r 445 MVFSDYSRPAIR-LASL------MGIRVIHVLTHDSIGLGEDGPTHQPVEHLAALRAIPDLLVLRPADSIETLECWQVAL 517 (673)
Q Consensus 445 ~~F~~~~~~~ir-~~al------~~~~v~~v~th~gi~~G~DGpTHq~iedia~lr~iPnl~v~~P~d~~E~~~~~~~al 517 (673)
T Consensus 84 ~~F~~~a~dQi~n~aa~~~~~~gg~~~vplvir~~~g-~g~~~g~~Hs~~~~a~~~~iPgl~Vv~Ps~~~da~~ll~~ai 162 (326)
T CHL00144 84 MGFLLLAFNQISNNAGMLHYTSGGNFTIPIVIRGPGG-VGRQLGAEHSQRLESYFQAVPGLQIVACSTPYNAKGLLKSAI 162 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCCCCCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHH
T ss_conf 7788999999999988986034786135799984777-678875412445688983389958995698788899999999
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 25678349995244443345665532212347379985699729999526889999999999997399439985746581
Q gi|254780655|r 518 KEKNRPSVLSLSRQNLPFLRTQYESNNLCALGAYDYISTPNAQVTIFSSGSELKIAVEACEILSSRNISTRVVSVPCFEL 597 (673)
Q Consensus 518 ~~~~gP~~ir~~R~~~p~~~~~~~~~~~~~~G~~~~~~~~~~dv~iia~G~~v~~al~aa~~L~~~Gi~~~Vi~~~s~k~ 597 (673)
T Consensus 163 ~~-~~Pv~~~e~~~ly~~~~~vp~~~~~~~~Gka~v~r-~G~DvTIVa~G~mv~~al~Aae~L~~~gI~~eVIDlrtl~P 240 (326)
T CHL00144 163 RS-DNPVLFFEHVLLYNLKEEIPDGEYLLPLEKAELVR-DGEDITILTYSRMRHHVIQAVKLLVTKGYDPEVIDLISLKP 240 (326)
T ss_pred HC-CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEE-ECCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 72-89818995345578764477655665467689997-27987999306779999999999997799768986045799
Q ss_pred HCCCCHHHHHHHCCCCCEEEEECCC-CHHHHH----HHHCC--------CCCEEEE-CCCCCCCCHHHHHHHCCCCHHHH
Q ss_conf 0008688999643679779997286-027899----98457--------9818983-57767688889999809998999
Q gi|254780655|r 598 FFEQSDSYRAQIIGSSPIKIAIEAG-LRQGWD----AFIGS--------DGSFIGM-QGFGASGSCDLLYQHFGINAIAI 663 (673)
Q Consensus 598 ld~~~~~~~~~il~~~~~~vtiE~g-~~~g~~----~~~~~--------~~~~igi-d~Fg~sg~~~el~~~~Gld~~~I 663 (673)
T Consensus 241 lD~e--~-I~~sv~kT~rlv~veE~~~~gG~Gsei~a~i~e~~f~~l~~p~~Ri~~~d~p~P~--s~~lE~~~~p~~~~I 315 (326)
T CHL00144 241 LDMT--T-ISTSIKKTHKVLIVEECMKTGGIGAELLALINENLFDELDAPIFRLSSQDVPTPY--NGSLEEATVIQPEQI 315 (326)
T ss_pred CCHH--H-HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC--CHHHHHHHCCCHHHH
T ss_conf 9999--9-9999985498999976998897899999999997586559997896889808989--977998759999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999848
Q gi|254780655|r 664 VDMVERKLS 672 (673)
Q Consensus 664 ~~~i~~~L~ 672 (673)
T Consensus 316 ~~av~~l~~ 324 (326)
T CHL00144 316 IEAVEQITN 324 (326)
T ss_pred HHHHHHHHC
T ss_conf 999999862